Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SNORA73.1-201ENST00000363107 205 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC016831.4-201ENST00000438302 307 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AL136455.1-201ENST00000441083 1240 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC068831.4-201ENST00000556118 109 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AL356218.2-201ENST00000605264 187 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 SMG1P6-201ENST00000532337 2930 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 HYDIN2-203ENST00000614586 13885 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 SNORA70.6-201ENST00000383934 134 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC011276.1-201ENST00000469688 323 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC010618.1-201ENST00000469924 477 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC027369.5-201ENST00000533838 755 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AP005901.4-201ENST00000577336 569 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AP005119.2-201ENST00000579735 1105 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 BNIP3P19-201ENST00000605397 577 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC005858.4-201ENST00000623191 700 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC000095.2-202ENST00000637415 154 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 NBPF8-201ENST00000583271 5330 ntBASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHANK3Q9BYB0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 SNORD46.1-201ENST00000364139 104 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 RPEP3-201ENST00000425462 676 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AL358232.1-201ENST00000448030 501 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 RPS5P7-201ENST00000456664 608 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 RN7SL290P-201ENST00000578661 300 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AC006130.2-201ENST00000586202 326 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AC025857.2-201ENST00000602711 238 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AL161756.2-201ENST00000604597 246 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 AC010480.1-201ENST00000624823 684 ntBASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.37□□□□□ -1.39
SHANK3Q9BYB0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC092681.1-201ENST00000297369 291 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 RN7SKP224-201ENST00000364140 325 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AL732292.1-201ENST00000426692 226 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC073052.1-201ENST00000440417 714 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 MTCO1P35-201ENST00000515270 228 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 MIR3939-201ENST00000582614 106 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SHANK3Q9BYB0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms