Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL163152.1-201ENST00000642001 374 ntBASIC4.73□□□□□ -1.65
SSX3Q99909 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSX3Q99909 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX3Q99909 HSPA8P18-201ENST00000439846 1928 ntBASIC4.73□□□□□ -1.65
SSX3Q99909 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.73□□□□□ -1.65
SSX3Q99909 AC011933.2-201ENST00000578539 2790 ntBASIC4.73□□□□□ -1.65
SSX3Q99909 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SSX3Q99909 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SSX3Q99909 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
SSX3Q99909 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SSX3Q99909 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SSX3Q99909 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.73□□□□□ -1.65
SSX3Q99909 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SSX3Q99909 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SSX3Q99909 MFSD8-239ENST00000641590 2479 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 RN7SKP185-201ENST00000362813 326 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.72□□□□□ -1.65
SSX3Q99909 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 CCNB2P1-201ENST00000399411 1150 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 RNU6-603P-201ENST00000411403 107 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 OR2AT2P-201ENST00000413438 905 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 SDHDP6-201ENST00000414693 480 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 MTCO3P21-201ENST00000430791 643 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 MTND4LP7-201ENST00000431728 294 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 AL353597.2-202ENST00000434901 373 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 AL391987.1-201ENST00000441025 200 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 HMGN1P36-201ENST00000446623 298 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 RPS6P2-201ENST00000454208 705 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 RNU1-88P-201ENST00000459274 128 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 AC015864.1-201ENST00000496512 544 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AC109481.1-201ENST00000509173 282 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 CYCSP22-201ENST00000517555 339 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.72□□□□□ -1.65
SSX3Q99909 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.72□□□□□ -1.65
SSX3Q99909 AC116447.1-201ENST00000613153 453 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 AC126175.1-201ENST00000617041 758 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 MAPK10-349ENST00000641767 3661 ntBASIC4.72□□□□□ -1.65
SSX3Q99909 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSX3Q99909 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
SSX3Q99909 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSX3Q99909 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSX3Q99909 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.72□□□□□ -1.65
SSX3Q99909 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SSX3Q99909 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SSX3Q99909 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX3Q99909 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX3Q99909 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 RN7SKP145-201ENST00000363291 303 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 RNA5SP500-201ENST00000364486 119 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 RN7SKP292-201ENST00000365522 317 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 RNU6-31P-201ENST00000384388 108 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX3Q99909 RN7SKP29-201ENST00000410957 272 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AC096921.1-201ENST00000411661 375 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 GPS2P1-201ENST00000411761 986 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 MRPL53P1-201ENST00000414323 319 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 RPL34P3-201ENST00000421454 338 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX3Q99909 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX3Q99909 AC064862.4-201ENST00000442180 334 ntBASIC4.71□□□□□ -1.66
SSX3Q99909 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX3Q99909 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms