Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 TMSB4XP2-201ENST00000335179 210 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 EIF4A1P3-201ENST00000411521 244 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AK4P4-201ENST00000419465 646 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC073464.3-201ENST00000422564 712 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC007161.1-204ENST00000423039 460 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 BX119321.1-201ENST00000428912 797 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 RPS24P8-201ENST00000431490 402 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 IGBP1P3-201ENST00000447449 1000 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC005229.2-201ENST00000456995 399 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 APOOP2-201ENST00000461561 539 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 RNU6-347P-201ENST00000516658 105 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 MIR548Y-201ENST00000582739 110 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 H3F3BP2-201ENST00000583907 357 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC005242.1-201ENST00000585658 438 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC108865.2-201ENST00000606881 432 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 AC016957.2-201ENST00000616998 848 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 FO681491.1-202ENST00000623392 737 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 OR8G3P-202ENST00000641572 1255 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 SAMMSON-227ENST00000642114 1199 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 MAPK10-304ENST00000641341 3984 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTP4A1Q93096 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 CCT8P1-201ENST00000413611 1657 ntBASIC4.99□□□□□ -1.61
PTP4A1Q93096 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PTP4A1Q93096 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 OR7E101P-201ENST00000400428 513 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 OR1F12-201ENST00000402365 945 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 RNA5SP487-201ENST00000410186 122 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 RN7SKP240-201ENST00000410583 375 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 RPSAP35-201ENST00000413753 818 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 HYALP1-201ENST00000417674 1279 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 RPL12P34-201ENST00000424532 479 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 RPL12P28-201ENST00000430852 489 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AP000942.1-201ENST00000463969 747 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC107398.1-201ENST00000486904 505 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 UBA52P3-201ENST00000491303 382 ntBASIC4.98□□□□□ -1.61
PTP4A1Q93096 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
PTP4A1Q93096 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms