Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 HMGB3P10-201ENST00000434734 572 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 ARL4AP3-201ENST00000441452 574 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 HMGB3P6-201ENST00000444896 598 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.56□□□□□ -1.36
DDX1Q92499 AL589880.1-201ENST00000448271 287 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX1Q92499 MTCO2P18-201ENST00000457151 658 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX1Q92499 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DDX1Q92499 AC095052.1-201ENST00000509955 863 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 ZNF519P4-201ENST00000514008 125 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 RNU6-1004P-201ENST00000516584 111 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.56□□□□□ -1.36
DDX1Q92499 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 MTND4P33-201ENST00000556706 766 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC007494.1-201ENST00000562293 760 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC007346.2-201ENST00000564816 892 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX1Q92499 AP001596.2-201ENST00000608410 312 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC024884.1-201ENST00000620583 399 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC069234.4-201ENST00000621276 412 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AC019226.1-201ENST00000625666 515 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 HSPD1P9-201ENST00000420325 1636 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
DDX1Q92499 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DDX1Q92499 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
DDX1Q92499 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
DDX1Q92499 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.56□□□□□ -1.36
DDX1Q92499 AC024651.2-201ENST00000562480 2098 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
DDX1Q92499 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
DDX1Q92499 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
DDX1Q92499 AC005261.4-201ENST00000600047 1385 ntBASIC6.56□□□□□ -1.36
DDX1Q92499 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
DDX1Q92499 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DDX1Q92499 RNU6-452P-201ENST00000384406 107 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 RNU6-636P-201ENST00000384598 107 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 MIR937-201ENST00000401271 86 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL121835.1-201ENST00000404250 354 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL035422.1-201ENST00000414193 397 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 RPS3AP37-201ENST00000419176 745 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC016027.5-201ENST00000427227 210 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC005345.1-201ENST00000431868 217 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC084290.1-201ENST00000434995 374 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 AC092170.1-201ENST00000440211 356 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX1Q92499 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX1Q92499 NPM1P13-201ENST00000452663 865 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX1Q92499 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL355032.1-201ENST00000472981 438 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC104685.1-201ENST00000502445 371 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX1Q92499 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX1Q92499 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX1Q92499 MTCO2P32-201ENST00000514865 403 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX1Q92499 AP001804.1-201ENST00000526868 919 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
DDX1Q92499 AC244502.2-201ENST00000543361 851 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.55□□□□□ -1.36
DDX1Q92499 CYCSP38-201ENST00000559840 322 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.55□□□□□ -1.36
DDX1Q92499 GARSP1-201ENST00000570895 719 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.55□□□□□ -1.36
DDX1Q92499 RBM11P1-201ENST00000604951 799 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.55□□□□□ -1.36
DDX1Q92499 AC141002.1-201ENST00000607025 279 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 AL080312.2-201ENST00000613001 630 ntBASIC6.55□□□□□ -1.36
DDX1Q92499 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms