Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 KYNUP3-201ENST00000574386 1341 ntBASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SIMC1Q8NDZ2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC015689.2-201ENST00000528172 1738 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 Y_RNA.169-201ENST00000363745 96 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 RN7SKP78-201ENST00000364711 318 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 RN7SKP28-201ENST00000364770 305 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 Y_RNA.436-201ENST00000384097 102 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AL121835.1-201ENST00000404250 354 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 HMGB1P13-201ENST00000406019 642 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 XKRYP4-201ENST00000414395 483 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 BX664727.1-201ENST00000416024 466 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AL035458.1-201ENST00000433096 585 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC007679.3-201ENST00000434035 414 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 YWHAZP2-201ENST00000440317 728 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 OR10R1P-201ENST00000441524 1141 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CYCSP51-201ENST00000443545 318 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 MTCO2P7-201ENST00000446518 666 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC004022.1-201ENST00000447766 1066 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 XKRYP5-201ENST00000449659 483 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC022431.1-201ENST00000450941 438 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC092155.2-201ENST00000454675 477 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 TPT1P1-201ENST00000458495 518 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC002456.2-201ENST00000509356 380 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC008494.2-201ENST00000514544 370 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 RNU6-1004P-201ENST00000516584 111 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AP000859.1-201ENST00000525536 307 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 OR10V3P-201ENST00000525712 725 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC012146.2-201ENST00000576545 416 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 MIR4502-201ENST00000580432 81 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 EIF1P5-201ENST00000585002 234 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AL109653.1-201ENST00000603091 248 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AP001823.1-201ENST00000604056 1003 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC124916.2-201ENST00000604416 224 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC141002.1-201ENST00000607025 279 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 VN1R9P-201ENST00000614184 867 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 HSPD1P9-201ENST00000420325 1636 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 AC021755.1-201ENST00000559747 1447 ntBASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SIMC1Q8NDZ2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.71□□□□□ -1.49
SIMC1Q8NDZ2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms