Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC079064.1-201ENST00000528365 362 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC005242.1-201ENST00000585658 438 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC067773.1-201ENST00000603284 1094 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 DUXAP10-204ENST00000612052 616 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 MIR1264-201ENST00000616374 69 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CXADRP3-202ENST00000617265 1100 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AP005431.1-201ENST00000618479 319 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC129915.3-201ENST00000634128 948 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 SAMMSON-227ENST00000642114 1199 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 ICE2P1-201ENST00000512800 1849 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC079097.1-201ENST00000512187 1399 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MT-RNR2-201ENST00000387347 1559 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL359715.3-201ENST00000569267 2123 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC093909.5-201ENST00000621839 1799 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC092681.1-201ENST00000297369 291 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 ST13P16-201ENST00000401760 781 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 RMRPP5-201ENST00000411156 267 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 CBX1P3-201ENST00000413296 527 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 SSR1P2-201ENST00000415208 787 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC007161.1-204ENST00000423039 460 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC092447.3-201ENST00000426027 686 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL512661.1-201ENST00000434586 1253 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 DNAJA1P5-201ENST00000440278 943 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC073465.2-201ENST00000440938 498 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 snoU109.3-201ENST00000459477 145 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC011476.1-201ENST00000466725 307 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC093534.1-201ENST00000504977 132 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC106730.2-201ENST00000566641 540 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MIR3936-201ENST00000584304 110 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL138895.2-201ENST00000603019 178 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL445435.1-201ENST00000604232 665 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL096803.3-201ENST00000609032 532 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC010632.3-201ENST00000611377 369 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MIR6071-201ENST00000616741 78 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL390318.1-201ENST00000624564 687 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 OR10AB1P-202ENST00000641219 1686 ntBASIC5.12□□□□□ -1.59
CLIP4Q8N3C7 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AL353796.1-201ENST00000561542 3241 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms