Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CDKL3Q8IVW4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDKL3Q8IVW4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDKL3Q8IVW4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDKL3Q8IVW4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RNU1-43P-201ENST00000365052 165 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RN7SKP114-201ENST00000410327 279 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RN7SKP126-201ENST00000411143 300 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 SETP15-201ENST00000412724 337 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC018638.3-201ENST00000461273 132 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RPS4XP12-201ENST00000461747 709 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RPS4XP1-201ENST00000482189 787 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 IGKV2-18-201ENST00000522607 343 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AC116553.2-201ENST00000564203 463 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AL139041.1-201ENST00000605480 610 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 AL139407.1-201ENST00000613826 1175 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 TMEM30CP-203ENST00000637814 1035 ntBASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDKL3Q8IVW4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC003985.2-201ENST00000562268 1669 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 RN7SKP162-201ENST00000363605 345 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 DUTP5-201ENST00000406790 469 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 SNORA77-201ENST00000408716 125 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AL034379.1-201ENST00000423216 253 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 HSPE1P16-201ENST00000426640 348 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 RPS29P9-201ENST00000440360 171 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AL391987.1-201ENST00000441025 200 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AL356981.1-201ENST00000454879 684 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC112184.1-201ENST00000505179 312 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 OR4A46P-201ENST00000527255 933 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC015914.2-201ENST00000618167 288 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC008115.4-201ENST00000619780 775 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AP002505.2-201ENST00000623585 696 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC097461.1-201ENST00000568928 2821 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
CDKL3Q8IVW4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC027228.2-201ENST00000567141 2154 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 RPL10P10-201ENST00000403509 664 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 AC233289.1-201ENST00000403700 508 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 CTSL3P-202ENST00000412179 788 ntBASIC5.18□□□□□ -1.58
CDKL3Q8IVW4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms