Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC000374.1-201ENST00000434698 1745 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 RN7SKP153-201ENST00000365026 316 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 NUDT19P3-201ENST00000404698 555 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC093162.1-201ENST00000419682 124 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 RPL19P16-201ENST00000433839 588 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 PSMD10P3-201ENST00000437000 448 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 MTCO3P17-201ENST00000443775 513 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 MTND4LP12-201ENST00000448237 295 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 IMPA1P1-201ENST00000510718 842 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC100784.1-201ENST00000522790 310 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC092490.3-201ENST00000545370 572 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 BX323046.1-201ENST00000610145 535 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AP005432.1-201ENST00000580891 3485 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AL672167.1-204ENST00000641875 3017 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AL450345.1-202ENST00000605741 3881 ntBASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFWD3Q6PCD5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC104260.2-201ENST00000623551 3497 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 SNURFL-201ENST00000309296 343 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RNU4-4P-201ENST00000364588 130 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC002524.1-201ENST00000411687 547 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC092647.3-201ENST00000443044 633 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RN7SL329P-201ENST00000467740 299 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RN7SL826P-201ENST00000479724 288 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RN7SL814P-201ENST00000487715 300 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC004980.4-201ENST00000513375 203 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RN7SKP147-201ENST00000517154 244 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC021733.2-201ENST00000518830 497 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 MIR3936-201ENST00000584304 110 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 AP005131.7-201ENST00000610087 611 ntBASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RFWD3Q6PCD5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 AL022393.1-201ENST00000625142 1677 ntBASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFWD3Q6PCD5 CASC19-281ENST00000642118 1554 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 TCP1P3-201ENST00000414406 1498 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AL161722.2-201ENST00000434731 981 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms