Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 Y_RNA.493-201ENST00000384422 102 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 MT-TW-201ENST00000387382 68 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 HMGB3P1-201ENST00000393368 573 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AL589647.1-201ENST00000402485 466 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RN7SKP144-201ENST00000411108 279 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 RPSAP62-201ENST00000432596 833 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC023512.1-201ENST00000444513 499 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 BTF3P5-201ENST00000457252 467 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 VN1R6P-201ENST00000458417 907 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RN7SL308P-201ENST00000464971 297 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RN7SL36P-201ENST00000469345 276 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC013356.1-201ENST00000489027 564 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 RN7SKP242-201ENST00000515967 289 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RNU6-1088P-201ENST00000516850 104 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RNU6-1003P-201ENST00000517099 105 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 RNU6-111P-201ENST00000517179 105 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 NARSP2-201ENST00000518524 679 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AP001804.3-201ENST00000525146 880 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 GNAI2P1-201ENST00000541815 315 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC092332.1-201ENST00000563684 829 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AL591167.1-201ENST00000607321 456 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 AC098657.3-201ENST00000620434 263 ntBASIC8.32□□□□□ -1.08
VARS2Q5ST30 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC8.32□□□□□ -1.08
VARS2Q5ST30 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
VARS2Q5ST30 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 RHOT1P2-201ENST00000366423 333 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 Y_RNA.414-201ENST00000384011 101 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 MIR27A-201ENST00000385073 78 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 H2AFZP3-201ENST00000394213 387 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL139397.2-201ENST00000404529 772 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 OR51A3P-201ENST00000413596 924 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 NENFP1-201ENST00000419476 466 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL133396.1-201ENST00000432048 687 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 GAPDHP34-201ENST00000432112 823 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 RN7SL19P-201ENST00000462522 306 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 RN7SL549P-201ENST00000478997 282 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL163973.1-201ENST00000484753 577 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 RPL21P42-201ENST00000488408 464 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 OR7E83P-201ENST00000511021 970 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 SLC2A13P1-201ENST00000531560 322 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL121579.2-201ENST00000555466 590 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 MIR3942-201ENST00000585264 109 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL031176.1-201ENST00000604554 466 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC027506.1-201ENST00000621395 198 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC011815.3-201ENST00000624194 473 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 AC010653.3-201ENST00000635332 232 ntBASIC8.31□□□□□ -1.08
VARS2Q5ST30 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
VARS2Q5ST30 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.31□□□□□ -1.08
VARS2Q5ST30 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms