Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CL1P78423 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC006484.1-201ENST00000435086 1884 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC023490.2-201ENST00000359859 470 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 RN7SKP145-201ENST00000363291 303 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 MIR142-201ENST00000384835 87 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 OR7E101P-201ENST00000400428 513 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AC245060.4-201ENST00000413293 1121 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 Z68694.1-201ENST00000413929 841 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC044797.1-201ENST00000445744 679 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AP006222.1-205ENST00000450734 457 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 NDUFA5P5-201ENST00000468361 342 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 RPS17P15-201ENST00000475609 349 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 RN7SL570P-201ENST00000484405 292 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 RPSAP51-201ENST00000497462 645 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 SCARNA6.1-201ENST00000516989 238 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 RNA5SP230-201ENST00000517039 122 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 SCARNA1-201ENST00000517138 166 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AC021678.3-201ENST00000517893 476 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AC020937.1-201ENST00000519677 1013 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AL359219.2-201ENST00000555184 348 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CL1P78423 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC096996.1-201ENST00000563813 325 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 HIRAP1-201ENST00000605318 787 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CL1P78423 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CL1P78423 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC099654.8-201ENST00000637757 681 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 TMEM30CP-203ENST00000637814 1035 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 AL445984.1-201ENST00000637834 659 ntBASIC4.56□□□□□ -1.68
CX3CL1P78423 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CL1P78423 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CL1P78423 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CL1P78423 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CL1P78423 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CL1P78423 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CL1P78423 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 AC017007.4-201ENST00000503353 1352 ntBASIC4.55□□□□□ -1.68
CX3CL1P78423 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CX3CL1P78423 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CL1P78423 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CL1P78423 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms