Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 AC092447.7-201ENST00000422212 1621 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 RNU6-317P-201ENST00000384031 107 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GFRA1P56159 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 HMGB3P7-201ENST00000400214 611 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RN7SKP188-201ENST00000410789 317 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RANP6-201ENST00000413691 644 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AL359092.1-201ENST00000417156 265 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 MRPS21P5-201ENST00000417885 231 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC004448.2-201ENST00000422360 586 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA1P56159 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA1P56159 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA1P56159 SULT1D1P-201ENST00000458020 882 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC104763.1-201ENST00000475274 360 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 AL161747.1-201ENST00000480068 358 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RN7SL413P-201ENST00000482700 297 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RN7SL561P-201ENST00000488553 281 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 BNIP3P41-201ENST00000503774 571 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA1P56159 RNU6-885P-201ENST00000516607 104 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.97□□□□□ -1.45
GFRA1P56159 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA1P56159 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA1P56159 MTND1P15-201ENST00000579262 949 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC138207.8-204ENST00000579588 527 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA1P56159 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.97□□□□□ -1.45
GFRA1P56159 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AL157899.1-201ENST00000604110 936 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 NDUFA8P1-201ENST00000605525 367 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC138749.5-201ENST00000611461 208 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC004241.2-201ENST00000614562 444 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC012676.3-201ENST00000614983 479 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 MIR6823-201ENST00000622118 61 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC018692.2-201ENST00000624130 348 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 AC015726.3-201ENST00000624501 418 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GFRA1P56159 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 MAPK10-365ENST00000641902 3825 ntBASIC5.97□□□□□ -1.45
GFRA1P56159 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA1P56159 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA1P56159 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA1P56159 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
GFRA1P56159 AC122713.2-201ENST00000624942 3335 ntBASIC5.96□□□□□ -1.45
GFRA1P56159 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.96□□□□□ -1.45
GFRA1P56159 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA1P56159 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 AC010329.1-201ENST00000593903 8328 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GFRA1P56159 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
GFRA1P56159 FAM32BP-201ENST00000344033 333 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 RNU6-374P-201ENST00000364146 108 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 RNU6-660P-201ENST00000364566 109 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 SNORA64.3-201ENST00000365647 134 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 RNU6-225P-201ENST00000384613 103 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA1P56159 NCSTNP1-201ENST00000406229 144 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AC068533.2-201ENST00000411872 306 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA1P56159 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA1P56159 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 AL645939.3-201ENST00000435408 225 ntBASIC5.96□□□□□ -1.46
GFRA1P56159 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA1P56159 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms