Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 AL022311.1-201ENST00000623726 19416 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 RN7SKP113-201ENST00000363891 295 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
COL8A2P25067 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 RNA5SP241-201ENST00000391326 114 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 RPL12P9-201ENST00000412942 488 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 CHEK2P3-201ENST00000416118 248 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 OR2AM1P-201ENST00000422137 422 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 BX323845.1-201ENST00000432417 179 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 PRPF38AP2-201ENST00000438179 851 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 RPS3AP41-201ENST00000462701 778 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.28□□□□□ -1.72
COL8A2P25067 RPL7P16-201ENST00000479738 738 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 RN7SL319P-201ENST00000480656 221 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC140172.1-201ENST00000502928 141 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC010350.1-201ENST00000504908 231 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 RNA5SP230-201ENST00000517039 122 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 PCNPP1-201ENST00000552501 511 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 NMNAT1P1-201ENST00000554095 876 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.28□□□□□ -1.72
COL8A2P25067 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 RN7SL290P-201ENST00000578661 300 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 AP005432.2-201ENST00000608162 586 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 Z95327.3-201ENST00000610385 572 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC073575.2-201ENST00000614212 627 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AL356752.1-201ENST00000615844 593 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.28□□□□□ -1.72
COL8A2P25067 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.28□□□□□ -1.72
COL8A2P25067 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.28□□□□□ -1.72
COL8A2P25067 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
COL8A2P25067 HSPA8P14-201ENST00000552265 1805 ntBASIC4.28□□□□□ -1.72
COL8A2P25067 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
COL8A2P25067 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL8A2P25067 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL8A2P25067 AC112198.2-201ENST00000426589 6996 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL8A2P25067 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL8A2P25067 SNORA2.3-201ENST00000383920 135 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 GNG5P5-201ENST00000420444 220 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC009238.2-201ENST00000431026 355 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.27□□□□□ -1.73
COL8A2P25067 BX842559.2-201ENST00000451418 605 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 NIFKP7-201ENST00000503365 834 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 MORF4L2P1-201ENST00000503761 858 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.27□□□□□ -1.73
COL8A2P25067 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 BTF3P13-201ENST00000513224 490 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.27□□□□□ -1.73
COL8A2P25067 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 RNA5SP43-201ENST00000516559 110 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 MIR4700-201ENST00000578311 74 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL8A2P25067 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL8A2P25067 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.27□□□□□ -1.73
COL8A2P25067 MIR4660-201ENST00000583549 74 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.27□□□□□ -1.73
COL8A2P25067 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 MEMO1P5-201ENST00000604810 406 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC005084.1-201ENST00000605160 304 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 FAM25E-202ENST00000608562 189 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 AC091953.3-201ENST00000623220 236 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AC112694.2-201ENST00000623697 768 ntBASIC4.27□□□□□ -1.73
COL8A2P25067 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL8A2P25067 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
COL8A2P25067 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL8A2P25067 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms