Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 OR1F2P-201ENST00000570470 933 ntBASIC4.5□□□□□ -1.69
USF1P22415 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.5□□□□□ -1.69
USF1P22415 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.5□□□□□ -1.69
USF1P22415 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 AC090527.3-201ENST00000619041 548 ntBASIC4.5□□□□□ -1.69
USF1P22415 uc_338.7-201ENST00000621834 124 ntBASIC4.5□□□□□ -1.69
USF1P22415 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.5□□□□□ -1.69
USF1P22415 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USF1P22415 TCP1P3-201ENST00000414406 1498 ntBASIC4.49□□□□□ -1.69
USF1P22415 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
USF1P22415 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.49□□□□□ -1.69
USF1P22415 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 RPL7P56-201ENST00000429441 717 ntBASIC4.49□□□□□ -1.69
USF1P22415 PSMD10P3-201ENST00000437000 448 ntBASIC4.49□□□□□ -1.69
USF1P22415 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 AC073648.4-201ENST00000442655 781 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.49□□□□□ -1.69
USF1P22415 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.49□□□□□ -1.69
USF1P22415 RPL5P16-201ENST00000471467 790 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC098583.1-201ENST00000480875 255 ntBASIC4.49□□□□□ -1.69
USF1P22415 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.49□□□□□ -1.69
USF1P22415 AC092593.2-201ENST00000513866 913 ntBASIC4.49□□□□□ -1.69
USF1P22415 EIF3KP3-201ENST00000514461 639 ntBASIC4.49□□□□□ -1.69
USF1P22415 RFPL4AP5-201ENST00000514977 504 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC024940.3-201ENST00000538551 316 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC068993.1-201ENST00000546724 589 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.49□□□□□ -1.69
USF1P22415 AL390726.5-202ENST00000564800 256 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.49□□□□□ -1.69
USF1P22415 MIR6820-201ENST00000611508 62 ntBASIC4.49□□□□□ -1.69
USF1P22415 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 AC099494.2-201ENST00000623371 978 ntBASIC4.49□□□□□ -1.69
USF1P22415 AL353662.3-201ENST00000625131 237 ntBASIC4.49□□□□□ -1.69
USF1P22415 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
USF1P22415 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
USF1P22415 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USF1P22415 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.49□□□□□ -1.69
USF1P22415 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
USF1P22415 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.48□□□□□ -1.69
USF1P22415 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 RN7SKP74-201ENST00000362849 309 ntBASIC4.48□□□□□ -1.69
USF1P22415 RNU4-4P-201ENST00000364588 130 ntBASIC4.48□□□□□ -1.69
USF1P22415 SNORD56.6-201ENST00000384569 71 ntBASIC4.48□□□□□ -1.69
USF1P22415 MIR105-1-201ENST00000385222 81 ntBASIC4.48□□□□□ -1.69
USF1P22415 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USF1P22415 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.48□□□□□ -1.69
USF1P22415 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.48□□□□□ -1.69
USF1P22415 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.48□□□□□ -1.69
USF1P22415 TRGV7-201ENST00000427089 353 ntBASIC4.48□□□□□ -1.69
USF1P22415 AL136231.1-201ENST00000429407 730 ntBASIC4.48□□□□□ -1.69
USF1P22415 NFYAP1-201ENST00000431953 972 ntBASIC4.48□□□□□ -1.69
USF1P22415 CBX1P2-201ENST00000453841 458 ntBASIC4.48□□□□□ -1.69
USF1P22415 HIGD1AP8-201ENST00000453927 274 ntBASIC4.48□□□□□ -1.69
USF1P22415 DNAJB5P1-201ENST00000454004 806 ntBASIC4.48□□□□□ -1.69
USF1P22415 Z92846.1-201ENST00000456203 268 ntBASIC4.48□□□□□ -1.69
USF1P22415 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms