Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.16□□□□□ -1.58
XRCC1P18887 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 OR4A46P-201ENST00000527255 933 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC024940.3-201ENST00000538551 316 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
XRCC1P18887 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 HMGN2P6-201ENST00000551091 273 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC044860.2-201ENST00000561005 179 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.16□□□□□ -1.58
XRCC1P18887 AC022884.2-201ENST00000578535 580 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 MIR4443-201ENST00000585052 53 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.16□□□□□ -1.58
XRCC1P18887 MIR6839-201ENST00000620425 113 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.16□□□□□ -1.58
XRCC1P18887 AL672167.1-204ENST00000641875 3017 ntBASIC5.16□□□□□ -1.58
XRCC1P18887 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
XRCC1P18887 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
XRCC1P18887 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.16□□□□□ -1.58
XRCC1P18887 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
XRCC1P18887 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.15□□□□□ -1.58
XRCC1P18887 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
XRCC1P18887 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.58
XRCC1P18887 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.15□□□□□ -1.58
XRCC1P18887 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
XRCC1P18887 OR9G4-201ENST00000302957 984 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 RNU6-249P-201ENST00000363016 102 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 RNA5SP507-201ENST00000363603 121 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 RNU1-146P-201ENST00000364015 165 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
XRCC1P18887 U3.36-201ENST00000408418 213 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
XRCC1P18887 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
XRCC1P18887 AC090018.1-201ENST00000434369 367 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 PTMAP6-201ENST00000439110 327 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.15□□□□□ -1.59
XRCC1P18887 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.15□□□□□ -1.59
XRCC1P18887 RPS18P6-201ENST00000476880 458 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 GTF2F2P1-201ENST00000511083 675 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.15□□□□□ -1.59
XRCC1P18887 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.15□□□□□ -1.59
XRCC1P18887 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.15□□□□□ -1.59
XRCC1P18887 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.15□□□□□ -1.59
XRCC1P18887 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.15□□□□□ -1.59
XRCC1P18887 MIR3936-201ENST00000584304 110 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.15□□□□□ -1.59
XRCC1P18887 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.15□□□□□ -1.59
XRCC1P18887 TAS2R6P-201ENST00000605022 826 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 RPSAP73-201ENST00000614820 330 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.15□□□□□ -1.59
XRCC1P18887 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
XRCC1P18887 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
XRCC1P18887 AC079298.1-201ENST00000625026 1619 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 AL031595.2-201ENST00000624215 19071 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
XRCC1P18887 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
XRCC1P18887 AL022393.1-201ENST00000625142 1677 ntBASIC5.15□□□□□ -1.59
XRCC1P18887 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
XRCC1P18887 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
XRCC1P18887 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 TCP1P3-201ENST00000414406 1498 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.14□□□□□ -1.59
XRCC1P18887 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
XRCC1P18887 SNORA74A-201ENST00000364089 198 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 NUDT19P3-201ENST00000404698 555 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 RN7SKP213-201ENST00000410746 298 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 CBX1P3-201ENST00000413296 527 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC104333.2-201ENST00000422630 192 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.14□□□□□ -1.59
XRCC1P18887 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 DNAJB5P1-201ENST00000454004 806 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 TPT1P1-201ENST00000458495 518 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.14□□□□□ -1.59
XRCC1P18887 RPSAP50-201ENST00000481955 852 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC008410.1-201ENST00000483777 339 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC091544.1-201ENST00000484702 348 ntBASIC5.14□□□□□ -1.59
XRCC1P18887 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms