Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AL355143.1-201ENST00000407101 841 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AL354692.1-201ENST00000423044 315 ntBASIC5.22□□□□□ -1.57
CDH1P12830 HSPD1P12-201ENST00000429127 1069 ntBASIC5.22□□□□□ -1.57
CDH1P12830 RPL12P17-201ENST00000432393 498 ntBASIC5.22□□□□□ -1.57
CDH1P12830 TXNP2-201ENST00000443918 295 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 AC090804.1-201ENST00000448870 490 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AL672138.1-201ENST00000450604 1015 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 AC092754.1-201ENST00000472975 479 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH1P12830 EIF1P7-201ENST00000487533 337 ntBASIC5.22□□□□□ -1.57
CDH1P12830 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH1P12830 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH1P12830 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH1P12830 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH1P12830 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC012146.2-201ENST00000576545 416 ntBASIC5.22□□□□□ -1.57
CDH1P12830 MTCYBP13-201ENST00000578634 1093 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC127024.5-201ENST00000580085 462 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH1P12830 AC108738.1-201ENST00000603703 237 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AL355802.4-201ENST00000607635 548 ntBASIC5.22□□□□□ -1.57
CDH1P12830 AL391834.1-201ENST00000609609 560 ntBASIC5.22□□□□□ -1.57
CDH1P12830 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH1P12830 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH1P12830 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH1P12830 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH1P12830 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH1P12830 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH1P12830 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH1P12830 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH1P12830 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CDH1P12830 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH1P12830 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CDH1P12830 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH1P12830 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.21□□□□□ -1.57
CDH1P12830 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH1P12830 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH1P12830 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 MIR133B-201ENST00000362210 119 ntBASIC5.21□□□□□ -1.58
CDH1P12830 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH1P12830 OR1L6-202ENST00000373684 1044 ntBASIC5.21□□□□□ -1.58
CDH1P12830 DBIP1-201ENST00000401435 260 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 CHEK2P5-201ENST00000423877 246 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH1P12830 PRUNEP1-201ENST00000425846 705 ntBASIC5.21□□□□□ -1.58
CDH1P12830 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 PRPF38AP1-201ENST00000451976 933 ntBASIC5.21□□□□□ -1.58
CDH1P12830 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH1P12830 RN7SL184P-201ENST00000488308 297 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH1P12830 HMGB1P44-201ENST00000508597 572 ntBASIC5.21□□□□□ -1.58
CDH1P12830 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH1P12830 CDC42P3-201ENST00000518493 633 ntBASIC5.21□□□□□ -1.58
CDH1P12830 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH1P12830 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 OR8A2P-201ENST00000528631 952 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 AC074029.2-201ENST00000551045 634 ntBASIC5.21□□□□□ -1.58
CDH1P12830 BLZF2P-201ENST00000553776 1130 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC027176.2-201ENST00000559166 746 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 AC106785.3-201ENST00000564064 847 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH1P12830 RBM22P1-201ENST00000578589 1214 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AP005262.1-201ENST00000582646 997 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC006272.2-201ENST00000594725 163 ntBASIC5.21□□□□□ -1.58
CDH1P12830 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH1P12830 SUGT1P3-202ENST00000604259 383 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH1P12830 AL356752.1-201ENST00000615844 593 ntBASIC5.21□□□□□ -1.58
CDH1P12830 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 AC023510.2-201ENST00000622162 746 ntBASIC5.21□□□□□ -1.58
CDH1P12830 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDH1P12830 AL049767.1-202ENST00000637826 242 ntBASIC5.21□□□□□ -1.58
CDH1P12830 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 DDX6P1-205ENST00000441966 1436 ntBASIC5.21□□□□□ -1.58
CDH1P12830 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH1P12830 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms