Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
CD28P10747 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 AC093909.5-201ENST00000621839 1799 ntBASIC4.05□□□□□ -1.76
CD28P10747 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CD28P10747 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 OR8V1P-201ENST00000395193 873 ntBASIC4.05□□□□□ -1.76
CD28P10747 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 MIR1182-201ENST00000408363 97 ntBASIC4.05□□□□□ -1.76
CD28P10747 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 AL445213.1-201ENST00000412589 747 ntBASIC4.05□□□□□ -1.76
CD28P10747 AL133482.1-201ENST00000415988 498 ntBASIC4.05□□□□□ -1.76
CD28P10747 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.05□□□□□ -1.76
CD28P10747 AL049745.1-201ENST00000433953 286 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC073648.4-201ENST00000442655 781 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.05□□□□□ -1.76
CD28P10747 TRY2P-201ENST00000448860 689 ntBASIC4.05□□□□□ -1.76
CD28P10747 CBX1P2-201ENST00000453841 458 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC079168.1-201ENST00000458741 345 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.05□□□□□ -1.76
CD28P10747 AC090142.2-201ENST00000483263 416 ntBASIC4.05□□□□□ -1.76
CD28P10747 HMGN2P25-201ENST00000486956 268 ntBASIC4.05□□□□□ -1.76
CD28P10747 RPL37AP8-201ENST00000494116 276 ntBASIC4.05□□□□□ -1.76
CD28P10747 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 RN7SKP260-201ENST00000516907 149 ntBASIC4.05□□□□□ -1.76
CD28P10747 PCNPP1-201ENST00000552501 511 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 AC010547.7-201ENST00000570323 333 ntBASIC4.05□□□□□ -1.76
CD28P10747 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.05□□□□□ -1.76
CD28P10747 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.05□□□□□ -1.76
CD28P10747 OR51C1P-201ENST00000608504 942 ntBASIC4.05□□□□□ -1.76
CD28P10747 AL139124.1-201ENST00000609123 421 ntBASIC4.05□□□□□ -1.76
CD28P10747 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.05□□□□□ -1.76
CD28P10747 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CD28P10747 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CD28P10747 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CD28P10747 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.05□□□□□ -1.76
CD28P10747 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 AP005435.3-201ENST00000531260 3198 ntBASIC4.04□□□□□ -1.76
CD28P10747 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.04□□□□□ -1.76
CD28P10747 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CD28P10747 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CD28P10747 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CD28P10747 NUDT19P3-201ENST00000404698 555 ntBASIC4.04□□□□□ -1.76
CD28P10747 RPA2P2-201ENST00000419698 796 ntBASIC4.04□□□□□ -1.76
CD28P10747 MGAT2P2-201ENST00000427194 797 ntBASIC4.04□□□□□ -1.76
CD28P10747 AL360081.1-201ENST00000428299 555 ntBASIC4.04□□□□□ -1.76
CD28P10747 FABP7P2-201ENST00000429946 379 ntBASIC4.04□□□□□ -1.76
CD28P10747 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 RPL31P44-201ENST00000447680 377 ntBASIC4.04□□□□□ -1.76
CD28P10747 NDUFA5P8-201ENST00000449019 346 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.04□□□□□ -1.76
CD28P10747 AC093827.1-201ENST00000480094 861 ntBASIC4.04□□□□□ -1.76
CD28P10747 DEFB109A-201ENST00000482450 265 ntBASIC4.04□□□□□ -1.76
CD28P10747 OR2A3P-201ENST00000493774 953 ntBASIC4.04□□□□□ -1.76
CD28P10747 RPSAP51-201ENST00000497462 645 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC105233.1-201ENST00000498840 781 ntBASIC4.04□□□□□ -1.76
CD28P10747 USP9YP2-201ENST00000504503 1000 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC138409.2-202ENST00000507274 458 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.04□□□□□ -1.76
CD28P10747 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.04□□□□□ -1.76
CD28P10747 USP9YP1-201ENST00000513521 1002 ntBASIC4.04□□□□□ -1.76
CD28P10747 HMGN1P9-201ENST00000515212 298 ntBASIC4.04□□□□□ -1.76
CD28P10747 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.04□□□□□ -1.76
CD28P10747 OR4A17P-201ENST00000526032 904 ntBASIC4.04□□□□□ -1.76
CD28P10747 AC079064.1-201ENST00000528365 362 ntBASIC4.04□□□□□ -1.76
CD28P10747 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.04□□□□□ -1.76
CD28P10747 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.04□□□□□ -1.76
CD28P10747 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.04□□□□□ -1.76
CD28P10747 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.04□□□□□ -1.76
CD28P10747 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.04□□□□□ -1.76
CD28P10747 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms