Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 AC027088.4-201ENST00000611559 1947 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
HMGB1P09429 RNA5SP391-201ENST00000363456 119 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 RNU1-65P-201ENST00000363919 148 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 AL121878.1-201ENST00000418638 859 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 RPL7P31-201ENST00000450192 724 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 RPL7P45-201ENST00000455851 743 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC096992.1-201ENST00000459808 709 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC104339.1-201ENST00000465478 348 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGB1P09429 AL122020.1-201ENST00000472287 459 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC006539.1-201ENST00000481419 501 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGB1P09429 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGB1P09429 RN7SKP238-201ENST00000516483 249 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGB1P09429 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 WBP1LP3-201ENST00000523033 208 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGB1P09429 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 AL049830.4-201ENST00000555149 351 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 MIR4776-2-201ENST00000580204 80 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AP000919.1-202ENST00000581139 1264 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC090312.2-201ENST00000582687 378 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 ADAD1P2-201ENST00000588476 646 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AL133481.2-203ENST00000607558 139 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AC009779.8-202ENST00000607990 932 ntBASIC6.94□□□□□ -1.3
HMGB1P09429 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGB1P09429 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
HMGB1P09429 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGB1P09429 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGB1P09429 AC004656.1-201ENST00000568479 4951 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 HNRNPDP2-201ENST00000406475 478 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 RNU2-65P-201ENST00000410162 185 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 RNA5SP431-201ENST00000410312 120 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 RN7SKP279-201ENST00000411383 298 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 BX664727.1-201ENST00000416024 466 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P09429 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 DEFA9P-201ENST00000433042 285 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 AC121161.1-201ENST00000510606 652 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGB1P09429 RNU6-467P-201ENST00000517027 110 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P09429 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGB1P09429 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGB1P09429 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGB1P09429 AC060780.2-201ENST00000589047 198 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 OR8A1-204ENST00000642111 1145 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
HMGB1P09429 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 AP005435.3-201ENST00000531260 3198 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 MTCO1P4-201ENST00000520516 1409 ntBASIC6.93□□□□□ -1.3
HMGB1P09429 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGB1P09429 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 RN7SKP78-201ENST00000364711 318 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC114814.2-201ENST00000419195 485 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms