Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MTND3P3-201ENST00000505004 126 ntBASIC5.29□□□□□ -1.56
LDLRP01130 HIGD1AP14-201ENST00000507617 282 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AC092451.2-201ENST00000538746 658 ntBASIC5.29□□□□□ -1.56
LDLRP01130 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AC008147.3-201ENST00000548666 354 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.29□□□□□ -1.56
LDLRP01130 RN7SL290P-201ENST00000578661 300 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 QTRT1P1-201ENST00000604344 1078 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.29□□□□□ -1.56
LDLRP01130 Mico1.1-201ENST00000611698 204 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC074140.1-201ENST00000621617 208 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC007683.2-201ENST00000624681 714 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AC026523.2-201ENST00000625039 7739 ntBASIC5.29□□□□□ -1.56
LDLRP01130 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 AC011755.1-201ENST00000623763 2049 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
LDLRP01130 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LDLRP01130 AL359715.3-201ENST00000569267 2123 ntBASIC5.29□□□□□ -1.56
LDLRP01130 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 Z95331.1-201ENST00000623075 23112 ntBASIC5.29□□□□□ -1.56
LDLRP01130 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LDLRP01130 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 MTND5P23-201ENST00000430812 1655 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AC003985.2-201ENST00000562268 1669 ntBASIC5.28□□□□□ -1.56
LDLRP01130 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 AC068870.1-201ENST00000563737 2455 ntBASIC5.28□□□□□ -1.56
LDLRP01130 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LDLRP01130 CCNB2P1-201ENST00000399411 1150 ntBASIC5.28□□□□□ -1.56
LDLRP01130 SNORA79B-201ENST00000410557 148 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 CNOT7P2-201ENST00000441051 832 ntBASIC5.28□□□□□ -1.56
LDLRP01130 MTND5P8-201ENST00000449817 1083 ntBASIC5.28□□□□□ -1.56
LDLRP01130 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
LDLRP01130 RN7SL72P-201ENST00000460697 269 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AC092905.1-201ENST00000467527 949 ntBASIC5.28□□□□□ -1.56
LDLRP01130 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 AC099521.1-201ENST00000482557 334 ntBASIC5.28□□□□□ -1.56
LDLRP01130 ENPP7P11-201ENST00000505915 627 ntBASIC5.28□□□□□ -1.56
LDLRP01130 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.28□□□□□ -1.56
LDLRP01130 AC098976.1-201ENST00000513014 541 ntBASIC5.28□□□□□ -1.56
LDLRP01130 RNU6-615P-201ENST00000516065 106 ntBASIC5.28□□□□□ -1.56
LDLRP01130 RNU6-491P-201ENST00000516099 110 ntBASIC5.28□□□□□ -1.56
LDLRP01130 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.28□□□□□ -1.56
LDLRP01130 AGGF1P7-201ENST00000562369 913 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AC106730.2-201ENST00000566641 540 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.28□□□□□ -1.56
LDLRP01130 AL512329.2-201ENST00000607350 548 ntBASIC5.28□□□□□ -1.56
LDLRP01130 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 AC008115.3-201ENST00000614874 549 ntBASIC5.28□□□□□ -1.56
LDLRP01130 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.28□□□□□ -1.56
LDLRP01130 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LDLRP01130 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LDLRP01130 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 RNU1-146P-201ENST00000364015 165 ntBASIC5.27□□□□□ -1.57
LDLRP01130 OR6K3-202ENST00000368146 996 ntBASIC5.27□□□□□ -1.57
LDLRP01130 MIR137-201ENST00000385223 102 ntBASIC5.27□□□□□ -1.57
LDLRP01130 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LDLRP01130 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.27□□□□□ -1.57
LDLRP01130 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.27□□□□□ -1.57
LDLRP01130 PTP4A1P1-201ENST00000420539 515 ntBASIC5.27□□□□□ -1.57
LDLRP01130 RIMKLBP2-201ENST00000424737 654 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AL139148.1-201ENST00000427122 680 ntBASIC5.27□□□□□ -1.57
LDLRP01130 AC092017.2-201ENST00000427600 362 ntBASIC5.27□□□□□ -1.57
LDLRP01130 MTCO1P51-201ENST00000427672 1060 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms