Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC019072.1-201ENST00000604535 1551 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC28A1O00337 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 RN7SKP74-201ENST00000362849 309 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 RNA5SP234-201ENST00000363916 119 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 RN7SKP124-201ENST00000364730 341 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 HMGB3P7-201ENST00000400214 611 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 AL390316.1-201ENST00000406279 553 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 MARK2P12-201ENST00000420129 585 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 MTND6P12-201ENST00000428247 522 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 MTCO1P57-201ENST00000432182 261 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 HMGN1P36-201ENST00000446623 298 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 LARP7P4-201ENST00000481075 878 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC069304.1-201ENST00000491593 704 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC012400.1-201ENST00000518452 381 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC109635.6-201ENST00000525487 1113 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC122134.1-201ENST00000565664 1104 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC006272.2-201ENST00000594725 163 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC28A1O00337 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 BX005214.3-202ENST00000619809 325 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 MIR8080-201ENST00000622224 89 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SLC28A1O00337 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC092747.4-201ENST00000620519 1861 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC28A1O00337 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 CASC19-248ENST00000641674 1356 ntBASIC5.02□□□□□ -1.61
SLC28A1O00337 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC28A1O00337 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SLC28A1O00337 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SLC28A1O00337 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC28A1O00337 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SLC28A1O00337 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC28A1O00337 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 RNU1-146P-201ENST00000364015 165 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 RNA5SP90-201ENST00000364801 99 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AL035079.1-201ENST00000405210 287 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 HSPE1P16-201ENST00000426640 348 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 RPS29P10-201ENST00000439197 166 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 MORF4L1P4-201ENST00000450245 976 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 YWHAEP1-201ENST00000453697 763 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 RPL7P45-201ENST00000455851 743 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC28A1O00337 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC28A1O00337 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC28A1O00337 RNA5SP373-201ENST00000517271 95 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.01□□□□□ -1.61
SLC28A1O00337 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC28A1O00337 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC28A1O00337 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms