Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC005242.1-201ENST00000585658 438 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL133247.2-201ENST00000603236 482 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL356986.1-201ENST00000604085 341 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL121936.2-201ENST00000641935 662 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 OR2AH1P-202ENST00000641232 2744 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AL589993.1-201ENST00000407450 2524 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 Y_RNA.142-201ENST00000363491 102 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 Y_RNA.578-201ENST00000390903 88 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 YWHAZP4-201ENST00000392459 708 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 FABP5P1-201ENST00000423401 411 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 RPS10P21-201ENST00000430654 475 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AL590103.1-201ENST00000434488 307 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 FABP5P2-201ENST00000439042 408 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 MTND6P6-201ENST00000478031 263 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 VPS26AP1-201ENST00000483197 979 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC111000.3-201ENST00000508057 576 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC011853.1-201ENST00000518911 454 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 UBE2NP1-201ENST00000545592 458 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AL591767.3-201ENST00000554632 525 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 OR7A11P-201ENST00000597719 953 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC063977.5-201ENST00000601044 974 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC006539.2-201ENST00000601729 572 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC069304.2-201ENST00000605154 435 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AC131009.3-201ENST00000621809 287 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 AP001052.1-201ENST00000626421 99 ntBASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PDZRN3Q9UPQ7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC105114.1-201ENST00000624795 1862 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 Y_RNA.401-201ENST00000383965 117 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 RNU6-1200P-201ENST00000384162 107 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 RNU6-1160P-201ENST00000384546 104 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 RNY3P10-201ENST00000384764 102 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 TPMTP3-201ENST00000411928 735 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AL389925.1-201ENST00000432257 728 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 EIF5AP4-201ENST00000441206 465 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC097359.1-201ENST00000447946 463 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 CEACAMP4-201ENST00000457676 421 ntBASIC8.68□□□□□ -1.02
PDZRN3Q9UPQ7 RPL5P13-201ENST00000462840 709 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms