Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUEDC1Q9NWM3 AP001350.1-201ENST00000601906 1524 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL078621.1-201ENST00000272567 768 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 Y_RNA.133-201ENST00000363428 110 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 RNA5SP302-201ENST00000364896 100 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 SSX6-201ENST00000376932 562 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MIR575-201ENST00000385013 94 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MIR559-201ENST00000385188 96 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MIR320B1-201ENST00000390209 79 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL157884.1-201ENST00000424561 454 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL831737.1-201ENST00000441288 271 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 RPS20P20-201ENST00000460498 340 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 NIFKP7-201ENST00000503365 834 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 NPY6R-201ENST00000503807 1112 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC104108.1-201ENST00000509930 412 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 CYP4F27P-201ENST00000514557 494 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-1281P-201ENST00000516223 105 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 RNU6-277P-201ENST00000516272 106 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC008083.2-201ENST00000546707 476 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC137768.1-201ENST00000549998 553 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MTCYBP13-201ENST00000578634 1093 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 OR5AH1P-201ENST00000595968 283 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AL390838.2-201ENST00000602394 274 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC113139.1-201ENST00000605049 239 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC004890.3-201ENST00000605566 1095 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC090525.3-201ENST00000605601 189 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC018692.2-201ENST00000624130 348 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 AC068880.5-201ENST00000624331 290 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 DDX50P1-201ENST00000438163 2400 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 Z99129.4-201ENST00000624649 2435 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 VEZF1P1-201ENST00000423931 1541 ntBASIC7.22□□□□□ -1.25
CUEDC1Q9NWM3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 AL357556.1-201ENST00000421884 1388 ntBASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 ATP5BP1-201ENST00000411980 1574 ntBASIC7.21□□□□□ -1.25
CUEDC1Q9NWM3 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms