Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AP001284.1-201ENST00000528393 2118 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 IQCB2P-201ENST00000401788 1633 ntBASIC9.41□□□□□ -0.9
RTN4Q9NQC3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RTN4Q9NQC3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 PPIAP24-201ENST00000328558 471 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 RNU6-451P-201ENST00000362921 107 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 HLA-DRA-201ENST00000374982 1169 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 RN7SKP154-201ENST00000410136 290 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AL731534.1-201ENST00000434711 269 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC007547.2-201ENST00000468802 360 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 RNA5SP228-201ENST00000516232 133 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 SNORD60.2-201ENST00000516883 86 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 IGLC5-201ENST00000519670 293 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 WBP1LP3-201ENST00000523033 208 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 HAUS8P1-201ENST00000549005 542 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC013553.2-201ENST00000604244 589 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC113554.1-201ENST00000606284 490 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AC127381.3-201ENST00000622901 303 ntBASIC9.4□□□□□ -0.9
RTN4Q9NQC3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
RTN4Q9NQC3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
RTN4Q9NQC3 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
RTN4Q9NQC3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC9.4□□□□□ -0.91
RTN4Q9NQC3 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
RTN4Q9NQC3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 MTND4P23-201ENST00000447723 1363 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 OR8B9P-202ENST00000642028 5216 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC008817.1-201ENST00000504215 1562 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 Y_RNA.86-201ENST00000363020 111 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 SNORA69-201ENST00000383895 132 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 RNU6-767P-201ENST00000384132 107 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 RPL7P58-201ENST00000402913 758 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AL359694.1-201ENST00000403247 604 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC108059.1-201ENST00000411629 725 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC006195.1-201ENST00000423599 923 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 MTND1P14-201ENST00000427400 950 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ATP5JP1-201ENST00000431631 322 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 RN7SL418P-201ENST00000473031 287 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 PAX8-211ENST00000497038 816 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC106872.4-201ENST00000510050 523 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 TMEM248P1-201ENST00000510579 951 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 RNU6-835P-201ENST00000516974 104 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC090572.1-201ENST00000519251 160 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 MIR3125-201ENST00000579927 78 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC025449.1-201ENST00000603896 529 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms