Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC010587.2-201ENST00000511727 448 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TCP11X3P-202ENST00000514289 1254 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 KCTD9P6-201ENST00000522306 950 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL121839.1-201ENST00000556233 1185 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC244034.2-201ENST00000562504 509 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 RPL29P33-201ENST00000587474 316 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC079315.1-201ENST00000602952 623 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL022154.1-201ENST00000604698 785 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC090578.1-201ENST00000604955 591 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC087045.1-201ENST00000605856 382 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL589743.7-201ENST00000612637 233 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC015819.1-201ENST00000613588 663 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC034229.6-201ENST00000623704 224 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC025048.6-202ENST00000627667 438 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL157786.1-207ENST00000627771 695 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LRRC77P-213ENST00000637727 880 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 MTCO1P18-201ENST00000455518 1419 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 KARSP1-201ENST00000451871 1752 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL353743.4-201ENST00000422653 1547 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 SMG1P5-202ENST00000529428 4219 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 SMG1P2-201ENST00000566127 4221 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC079949.2-201ENST00000617117 2933 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 OR10J6P-201ENST00000289731 930 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 Y_RNA.554-201ENST00000384672 102 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 RPL17P50-201ENST00000396131 546 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 RANP6-201ENST00000413691 644 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC138393.2-201ENST00000414742 246 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 FAM183DP-201ENST00000421987 399 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC009480.2-201ENST00000422916 432 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 GLRXP1-201ENST00000423261 334 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 NPM1P24-201ENST00000428039 894 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL645939.3-201ENST00000435408 225 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 GAPDHP37-201ENST00000442317 968 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC092601.1-201ENST00000444526 383 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 PAXBP1P1-201ENST00000449315 447 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 MTND1P11-201ENST00000456661 876 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL121769.1-201ENST00000469473 401 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC072039.1-201ENST00000477611 581 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 WBP1LP4-201ENST00000505043 344 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 MIR3157-201ENST00000578688 85 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 AC138207.8-204ENST00000579588 527 ntBASIC5.54□□□□□ -1.52
SSBP3Q9BWW4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms