Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AC111000.5-201ENST00000506559 1178 ntBASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AC021006.3-201ENST00000530771 192 ntBASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AL359219.2-201ENST00000555184 348 ntBASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AC011840.5-201ENST00000582125 771 ntBASIC7.17□□□□□ -1.26
SIN3AQ96ST3 AL356752.1-201ENST00000615844 593 ntBASIC7.17□□□□□ -1.26
SIN3AQ96ST3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.17□□□□□ -1.26
SIN3AQ96ST3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 NPM1P37-201ENST00000403105 874 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL136116.2-201ENST00000404020 785 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 TRGV5P-201ENST00000419915 354 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL645608.4-201ENST00000423619 154 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL157385.1-201ENST00000446973 268 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 BTF3P6-201ENST00000448054 499 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 HNRNPRP2-201ENST00000528421 743 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AGGF1P9-201ENST00000561884 913 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 MIR4646-201ENST00000580775 63 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL139041.1-201ENST00000605480 610 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 Z95327.3-201ENST00000610385 572 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL049794.2-201ENST00000616301 365 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 BX005214.3-202ENST00000619809 325 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AL445528.2-201ENST00000620582 470 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 AC009643.2-201ENST00000603543 1448 ntBASIC7.16□□□□□ -1.26
SIN3AQ96ST3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SIN3AQ96ST3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AP002530.1-201ENST00000405705 684 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 RNA5SP345-201ENST00000410646 108 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC013429.2-201ENST00000418798 781 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC004074.1-201ENST00000421810 1063 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 BRWD1P3-201ENST00000428816 390 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AL590399.4-201ENST00000436561 601 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 NDUFB5P1-201ENST00000508134 564 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AC020910.3-201ENST00000603701 874 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 AL022394.1-201ENST00000606979 292 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 ZNF652P1-201ENST00000442420 1309 ntBASIC7.15□□□□□ -1.26
SIN3AQ96ST3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC7.15□□□□□ -1.26
SIN3AQ96ST3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SIN3AQ96ST3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 SNORA73.1-201ENST00000363107 205 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 PCNPP4-201ENST00000414817 517 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AC010733.1-201ENST00000451515 401 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 OR2A3P-201ENST00000493774 953 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AC098799.1-201ENST00000504752 800 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AC105031.1-201ENST00000518550 476 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AL049839.1-201ENST00000556151 657 ntBASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.14□□□□□ -1.27
SIN3AQ96ST3 AP002884.5-201ENST00000595053 1132 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms