Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC073052.1-201ENST00000440417 714 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 HSFY3P-201ENST00000444242 1191 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 OR6K5P-201ENST00000447050 945 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 TRY2P-201ENST00000448860 689 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC016724.1-201ENST00000453215 421 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AL358876.1-201ENST00000453364 1075 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC239798.3-201ENST00000454459 408 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC012123.2-201ENST00000485809 248 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC006499.4-201ENST00000510947 694 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC074255.1-201ENST00000511259 501 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC008837.1-201ENST00000511513 412 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC118465.1-201ENST00000513820 1271 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 RNA5SP303-201ENST00000516192 130 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC139365.2-201ENST00000517972 253 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 HMGB1P1-201ENST00000522557 636 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 MTND4P33-201ENST00000556706 766 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC096996.1-201ENST00000563813 325 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 MIR4433B-201ENST00000581329 102 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 MIR4260-201ENST00000583107 67 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC060780.2-201ENST00000589047 198 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AL513327.3-201ENST00000602618 469 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 AC112694.2-201ENST00000623697 768 ntBASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.4□□□□□ -1.54
CTHRC1Q96CG8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 KYNUP3-201ENST00000574386 1341 ntBASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 AP004607.3-201ENST00000530354 3915 ntBASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 AL133268.1-201ENST00000405676 1401 ntBASIC5.4□□□□□ -1.55
CTHRC1Q96CG8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC011503.2-201ENST00000594230 1500 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 ANKRD36P1-201ENST00000344424 659 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 RNA5SP91-201ENST00000390902 119 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 Y_RNA.578-201ENST00000390903 88 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 DNAJC19P6-201ENST00000401853 280 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AL357752.1-201ENST00000412817 349 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 HMGB1P49-201ENST00000418882 569 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AK4P4-201ENST00000419465 646 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 HSPE1P16-201ENST00000426640 348 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AL590399.2-201ENST00000427536 309 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC126120.1-201ENST00000431082 470 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC084290.1-201ENST00000434995 374 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 YWHAZP2-201ENST00000440317 728 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 RPL12P39-201ENST00000455456 496 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 RPL7P45-201ENST00000455851 743 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC023050.1-201ENST00000498198 304 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms