Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR4260-201ENST00000583107 67 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.27□□□□□ -1.41
HPS3Q969F9 AC006116.5-201ENST00000591936 559 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 AL606834.3-201ENST00000602615 496 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 AC025857.2-201ENST00000602711 238 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 AC099785.1-201ENST00000605697 437 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.27□□□□□ -1.41
HPS3Q969F9 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.27□□□□□ -1.41
HPS3Q969F9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.27□□□□□ -1.41
HPS3Q969F9 AC132825.7-201ENST00000638744 335 ntBASIC6.27□□□□□ -1.41
HPS3Q969F9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HPS3Q969F9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HPS3Q969F9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HPS3Q969F9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HPS3Q969F9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HPS3Q969F9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.27□□□□□ -1.41
HPS3Q969F9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HPS3Q969F9 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 PROS2P-201ENST00000474651 1951 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HPS3Q969F9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HPS3Q969F9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 RPL11P3-201ENST00000395256 523 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 ANAPC10P1-201ENST00000395991 556 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 RPSAP35-201ENST00000413753 818 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 SLC20A1P1-201ENST00000413906 956 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 RPS3P2-201ENST00000421346 701 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC005189.1-201ENST00000431286 310 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 MED6P1-201ENST00000439659 713 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 CDH12P2-201ENST00000504393 298 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC011411.1-201ENST00000509592 876 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 RN7SKP253-201ENST00000516424 309 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 SNORA70.20-201ENST00000516848 126 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC034205.1-201ENST00000520621 638 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 HMGB1P42-201ENST00000532126 553 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.26□□□□□ -1.41
HPS3Q969F9 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AL049830.4-201ENST00000555149 351 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.26□□□□□ -1.41
HPS3Q969F9 AC079610.2-201ENST00000604818 690 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC109809.1-201ENST00000619665 545 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AC026124.2-201ENST00000621847 656 ntBASIC6.26□□□□□ -1.41
HPS3Q969F9 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.26□□□□□ -1.41
HPS3Q969F9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HPS3Q969F9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.26□□□□□ -1.41
HPS3Q969F9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.26□□□□□ -1.41
HPS3Q969F9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HPS3Q969F9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 AL158152.1-201ENST00000602652 1435 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 CDC27P2-201ENST00000425026 1922 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.25□□□□□ -1.41
HPS3Q969F9 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HPS3Q969F9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 HMGN1P20-201ENST00000411849 300 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 Z68694.1-201ENST00000413929 841 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AL662874.1-201ENST00000426065 230 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.25□□□□□ -1.41
HPS3Q969F9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.25□□□□□ -1.41
HPS3Q969F9 SUMO2P3-201ENST00000438311 288 ntBASIC6.25□□□□□ -1.41
HPS3Q969F9 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HPS3Q969F9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.25□□□□□ -1.41
HPS3Q969F9 RPS3AP53-201ENST00000454716 778 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms