Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC009704.2-201ENST00000618739 483 ntBASIC4.44□□□□□ -1.7
AP3S1Q92572 AL158062.1-201ENST00000619632 745 ntBASIC4.44□□□□□ -1.7
AP3S1Q92572 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
AP3S1Q92572 AC108751.5-201ENST00000492880 1336 ntBASIC4.44□□□□□ -1.7
AP3S1Q92572 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP3S1Q92572 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 RNU1-94P-201ENST00000362627 173 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 SNORA73.1-201ENST00000363107 205 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RNA5SP232-201ENST00000364144 119 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 SNORA2.3-201ENST00000383920 135 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RNA5SP372-201ENST00000390836 115 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 MIR1203-201ENST00000408812 85 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RN7SKP38-201ENST00000410782 309 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 MEAF6P1-201ENST00000416092 327 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 CYCSP10-201ENST00000417973 294 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 GTF2IP2-201ENST00000424290 697 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.43□□□□□ -1.7
AP3S1Q92572 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 AC104634.1-201ENST00000452720 462 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 HSPE1P22-201ENST00000456856 327 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RN7SL41P-201ENST00000476144 297 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RN7SL809P-201ENST00000482040 297 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.43□□□□□ -1.7
AP3S1Q92572 RNA5SP360-201ENST00000516555 118 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AP002981.1-201ENST00000517692 975 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AC078878.1-201ENST00000539832 958 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.43□□□□□ -1.7
AP3S1Q92572 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.43□□□□□ -1.7
AP3S1Q92572 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.43□□□□□ -1.7
AP3S1Q92572 ATP5J2P6-201ENST00000565203 266 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 RN7SL176P-201ENST00000580352 264 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP3S1Q92572 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.43□□□□□ -1.7
AP3S1Q92572 RPL26P30-202ENST00000602923 645 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 AC114786.1-201ENST00000512892 1415 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 OR51C1P-202ENST00000641159 1444 ntBASIC4.43□□□□□ -1.7
AP3S1Q92572 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
AP3S1Q92572 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
AP3S1Q92572 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.43□□□□□ -1.7
AP3S1Q92572 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
AP3S1Q92572 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
AP3S1Q92572 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 KARSP1-201ENST00000451871 1752 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 CASC19-204ENST00000641001 2055 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.42□□□□□ -1.7
AP3S1Q92572 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 OR51H2P-202ENST00000641424 3046 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 AC008549.2-201ENST00000333482 706 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 RN7SKP104-201ENST00000362605 328 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 RNA5SP90-201ENST00000364801 99 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP3S1Q92572 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.42□□□□□ -1.7
AP3S1Q92572 HMGB3P7-201ENST00000400214 611 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 CDY17P-201ENST00000414121 1282 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 AL590609.2-201ENST00000421430 368 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 CLCN3P1-201ENST00000423965 1017 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 CDY8P-201ENST00000428380 1279 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.42□□□□□ -1.7
AP3S1Q92572 PPIAP13-201ENST00000434706 478 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.42□□□□□ -1.7
AP3S1Q92572 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.42□□□□□ -1.7
AP3S1Q92572 CDY20P-201ENST00000447528 1279 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.42□□□□□ -1.7
AP3S1Q92572 AC004890.1-201ENST00000461005 181 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 AC068228.1-201ENST00000461723 211 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.42□□□□□ -1.7
AP3S1Q92572 AL117692.1-201ENST00000494283 713 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 AC104971.1-201ENST00000495117 578 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.42□□□□□ -1.7
AP3S1Q92572 AC093325.1-201ENST00000508378 326 ntBASIC4.42□□□□□ -1.7
AP3S1Q92572 LDHAP1-201ENST00000509421 992 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms