Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RN7SKP95-201ENST00000362860 303 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RN7SKP113-201ENST00000363891 295 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 CYP4F29P-201ENST00000420685 446 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC245028.2-201ENST00000458673 253 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 MYL12BP2-201ENST00000503948 512 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC093720.1-201ENST00000505681 714 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 MIR4270-201ENST00000581799 70 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC002069.2-201ENST00000603580 883 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ZNF733P-202ENST00000444809 1573 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 CASC19-281ENST00000642118 1554 ntBASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SHROOM3Q8TF72 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 TRIM51GP-201ENST00000534741 1350 ntBASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 AP005432.1-201ENST00000580891 3485 ntBASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHROOM3Q8TF72 NLRP3P1-201ENST00000622303 1785 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 RN7SKP153-201ENST00000365026 316 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 OR5M12P-201ENST00000423388 929 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC093414.1-201ENST00000434712 514 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC022133.1-201ENST00000490961 571 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 COX6B1P5-201ENST00000509843 249 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC026402.1-201ENST00000513642 170 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 FRG1EP-201ENST00000634469 770 ntBASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHROOM3Q8TF72 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AL390316.1-201ENST00000406279 553 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 QRSL1P2-201ENST00000418582 964 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 USP9YP9-201ENST00000429406 715 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC068287.1-201ENST00000430283 295 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 HMGB1P4-201ENST00000455362 567 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC012400.1-201ENST00000518452 381 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC022360.1-201ENST00000521058 340 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 MIR4660-201ENST00000583549 74 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC002525.1-201ENST00000624392 1622 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC002090.1-201ENST00000625000 2138 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 RNU4-2-201ENST00000365668 141 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 MRPS21P2-201ENST00000424704 264 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 RPL12P17-201ENST00000432393 498 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC073052.1-201ENST00000440417 714 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC093824.1-201ENST00000508796 343 ntBASIC5.2□□□□□ -1.58
SHROOM3Q8TF72 AC010245.2-201ENST00000606908 1167 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms