Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNF439Q8NDP4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC093909.5-201ENST00000621839 1799 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RNA5SP90-201ENST00000364801 99 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RPL21P67-201ENST00000402896 478 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 PTP4A1P1-201ENST00000420539 515 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC093655.2-201ENST00000425735 631 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 FAM96AP1-201ENST00000430879 482 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC021660.1-201ENST00000465006 554 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AL136038.1-201ENST00000497246 351 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 UGT2A3P7-201ENST00000510485 734 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RFPL4AP3-201ENST00000515267 345 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 IGKV3D-34-201ENST00000522638 302 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC107918.3-201ENST00000533272 382 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AP002884.5-201ENST00000595053 1132 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC090527.3-201ENST00000619041 548 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 CYP4F35P-202ENST00000636121 390 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AL731532.2-201ENST00000623542 1953 ntBASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.27□□□□□ -1.73
ZNF439Q8NDP4 AC000374.1-201ENST00000434698 1745 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 MTND5P23-201ENST00000430812 1655 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 RNA5SP223-201ENST00000365174 120 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 OR8V1P-201ENST00000395193 873 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AL121776.1-201ENST00000429337 372 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC009238.2-201ENST00000431026 355 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC008410.1-201ENST00000483777 339 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC108693.1-201ENST00000496068 432 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC015864.1-201ENST00000496512 544 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 MYL12BP2-201ENST00000503948 512 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC097173.1-201ENST00000505862 819 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 LDHBP3-201ENST00000514909 822 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC069307.1-201ENST00000602820 447 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AL137072.1-201ENST00000603444 466 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC079395.2-201ENST00000610982 737 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC136428.4-201ENST00000634254 1155 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 CASC19-221ENST00000641309 1382 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 MAPK10-320ENST00000641462 6696 ntBASIC4.26□□□□□ -1.73
ZNF439Q8NDP4 AP001642.1-201ENST00000624727 2117 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms