Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 USP9YP9-201ENST00000429406 715 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 BTF3P6-201ENST00000448054 499 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AL356390.1-201ENST00000455684 397 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 IGKV1-32-201ENST00000519290 311 ntBASIC7.67□□□□□ -1.18
VPS8Q8N3P4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
VPS8Q8N3P4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 NCLP2-201ENST00000416078 1462 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AL139128.1-201ENST00000413921 941 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 VN1R37P-201ENST00000419096 748 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 LINC00993-201ENST00000420453 540 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 OR2B7P-201ENST00000429302 934 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 RPL35AP21-201ENST00000437667 333 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AP001880.2-201ENST00000538233 448 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC098935.2-201ENST00000604222 466 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 MIR6748-201ENST00000610433 71 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AP000648.2-201ENST00000624182 404 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC073342.3-201ENST00000624211 193 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 HSPA8P14-201ENST00000552265 1805 ntBASIC7.66□□□□□ -1.18
VPS8Q8N3P4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
VPS8Q8N3P4 AC010928.1-201ENST00000592477 1447 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 AC002525.1-201ENST00000624392 1622 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 RNA5SP443-201ENST00000363083 132 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 PCNPP4-201ENST00000414817 517 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 AL590139.1-201ENST00000416267 400 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 AC105031.1-201ENST00000518550 476 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 BUD31P1-201ENST00000521828 359 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 MIR5699-201ENST00000578903 90 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.65□□□□□ -1.18
VPS8Q8N3P4 Z95327.3-201ENST00000610385 572 ntBASIC7.65□□□□□ -1.18
VPS8Q8N3P4 SOCS5P3-201ENST00000425115 1576 ntBASIC7.65□□□□□ -1.19
VPS8Q8N3P4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
VPS8Q8N3P4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 CYB5AP4-201ENST00000396692 399 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AL035419.1-201ENST00000397037 564 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC019050.1-201ENST00000418508 492 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 RPA2P2-201ENST00000419698 796 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC104333.2-201ENST00000422630 192 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 FABP7P1-201ENST00000424004 391 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC005868.1-201ENST00000536421 331 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC007497.1-201ENST00000610421 561 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 AC073136.1-201ENST00000449426 2884 ntBASIC7.64□□□□□ -1.19
VPS8Q8N3P4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
VPS8Q8N3P4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
VPS8Q8N3P4 DNM1P47-203ENST00000571780 12667 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 Y_RNA.625-201ENST00000411256 107 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AL359265.2-201ENST00000434367 631 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AC011005.3-201ENST00000491624 395 ntBASIC7.63□□□□□ -1.19
VPS8Q8N3P4 AC104971.1-201ENST00000495117 578 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms