Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 RNA5SP346-201ENST00000363541 121 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 RN7SKP166-201ENST00000410812 305 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC006366.1-201ENST00000422002 759 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 RPL5P7-201ENST00000444235 813 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 NPM1P49-201ENST00000448027 714 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL133351.3-201ENST00000454998 193 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 CDC42P1-201ENST00000456658 548 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC084754.1-201ENST00000463466 464 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC092045.1-201ENST00000495716 1231 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC084337.1-201ENST00000524809 686 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 TOMM20P1-201ENST00000534518 427 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC006512.2-201ENST00000543250 486 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL049870.4-201ENST00000555741 486 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 MIR4999-201ENST00000585029 91 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL583832.1-201ENST00000603227 784 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL008723.3-201ENST00000608926 449 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC005332.10-201ENST00000612725 619 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 AC073488.6-201ENST00000632293 754 ntBASIC6.15□□□□□ -1.42
TRIM48Q8IWZ4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 PARP4P1-201ENST00000435945 2337 ntBASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM48Q8IWZ4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC027514.1-201ENST00000588561 1603 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 OR56A4-201ENST00000330728 1209 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 RNA5SP431-201ENST00000410312 120 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AL035422.1-201ENST00000414193 397 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC027644.1-201ENST00000419595 298 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AL354707.3-201ENST00000427308 331 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 H3F3BP1-201ENST00000440551 403 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 MTND3P1-201ENST00000441336 220 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 MRPL42P4-201ENST00000453267 443 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC009963.3-201ENST00000458090 486 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC104971.1-201ENST00000495117 578 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 PRELID3BP4-201ENST00000515476 571 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 MTATP6P3-201ENST00000581686 676 ntBASIC6.14□□□□□ -1.43
TRIM48Q8IWZ4 ZNF415P1-201ENST00000582279 1166 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms