Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 NCOA4P2-201ENST00000340589 1813 ntBASIC4.28□□□□□ -1.72
ARFGEF3Q5TH69 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC010733.1-201ENST00000451515 401 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SL197P-201ENST00000466981 299 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SL860P-201ENST00000473738 223 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SL459P-201ENST00000481078 302 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RPSAP51-201ENST00000497462 645 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC019206.1-201ENST00000621938 425 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 MIR7641-1-201ENST00000627518 61 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 U3.30-201ENST00000391308 210 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SKP16-201ENST00000410180 299 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RNA5SP113-201ENST00000410486 84 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 GPS2P1-201ENST00000411761 986 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 HYALP1-201ENST00000417674 1279 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SL738P-201ENST00000470264 297 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC093827.1-201ENST00000480094 861 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC010350.1-201ENST00000504908 231 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC098976.1-201ENST00000513014 541 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 RN7SL371P-201ENST00000578099 267 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 MTCYBP13-201ENST00000578634 1093 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARFGEF3Q5TH69 ZNF652P1-201ENST00000442420 1309 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC013442.1-201ENST00000397347 228 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 RPL37P18-201ENST00000411602 243 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 RSU1P3-201ENST00000412878 835 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 RNA5SP228-201ENST00000516232 133 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC012339.2-201ENST00000523996 453 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC018552.1-201ENST00000562099 811 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC091042.1-201ENST00000579213 173 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 SETP3-201ENST00000581726 813 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC087283.1-201ENST00000604029 1074 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AL022394.1-201ENST00000606979 292 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 ECM1P2-201ENST00000503354 1577 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 AC092451.3-201ENST00000625067 1343 ntBASIC4.26□□□□□ -1.73
ARFGEF3Q5TH69 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms