Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.63□□□□□ -1.35
COL16A1Q07092 SNORA70.10-201ENST00000384515 134 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 SCARNA13-201ENST00000516672 275 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 AC090948.1-201ENST00000607464 549 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 AC023043.4-201ENST00000612081 449 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 AL022401.1-201ENST00000619498 108 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.63□□□□□ -1.35
COL16A1Q07092 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 STX3-208ENST00000641815 3236 ntBASIC6.63□□□□□ -1.35
COL16A1Q07092 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL16A1Q07092 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 AL672167.2-201ENST00000377164 879 ntBASIC6.62□□□□□ -1.35
COL16A1Q07092 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.62□□□□□ -1.35
COL16A1Q07092 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.62□□□□□ -1.35
COL16A1Q07092 BUD31P1-201ENST00000521828 359 ntBASIC6.62□□□□□ -1.35
COL16A1Q07092 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.62□□□□□ -1.35
COL16A1Q07092 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 AC099676.1-201ENST00000608886 657 ntBASIC6.62□□□□□ -1.35
COL16A1Q07092 AC007497.1-201ENST00000610421 561 ntBASIC6.62□□□□□ -1.35
COL16A1Q07092 AC087821.1-201ENST00000623639 567 ntBASIC6.62□□□□□ -1.35
COL16A1Q07092 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.62□□□□□ -1.35
COL16A1Q07092 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL16A1Q07092 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL16A1Q07092 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.62□□□□□ -1.35
COL16A1Q07092 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL16A1Q07092 RPS26P8-201ENST00000393490 348 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 CYCSP19-201ENST00000411715 316 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 AL132765.1-201ENST00000434165 553 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 RPS3AP54-201ENST00000435535 734 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 ACTR3P2-201ENST00000439585 1257 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 RRM2P4-201ENST00000441721 562 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 MRPL35P2-201ENST00000448009 511 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AC069061.3-201ENST00000582254 823 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.61□□□□□ -1.35
COL16A1Q07092 BNIP3P11-201ENST00000603878 563 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL16A1Q07092 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.61□□□□□ -1.35
COL16A1Q07092 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL16A1Q07092 RN7SKP153-201ENST00000365026 316 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 AC097523.2-201ENST00000435551 652 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 HSFY6P-201ENST00000445573 403 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 RN7SL441P-201ENST00000492388 296 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.61□□□□□ -1.35
COL16A1Q07092 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.61□□□□□ -1.35
COL16A1Q07092 OR4A2P-201ENST00000527276 913 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 AL133338.2-201ENST00000604292 736 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 AL023881.1-201ENST00000621088 301 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.61□□□□□ -1.35
COL16A1Q07092 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL16A1Q07092 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL16A1Q07092 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.6□□□□□ -1.35
COL16A1Q07092 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.6□□□□□ -1.35
COL16A1Q07092 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL16A1Q07092 PRNCR1-201ENST00000635449 12727 ntBASIC6.6□□□□□ -1.35
COL16A1Q07092 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.6□□□□□ -1.35
COL16A1Q07092 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL16A1Q07092 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.6□□□□□ -1.35
COL16A1Q07092 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms