Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC007559.1-201ENST00000428736 355 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.93□□□□□ -1.46
GABPAQ06546 AC046176.1-201ENST00000435260 1170 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 OR52J1P-201ENST00000450596 932 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 RPS29P22-201ENST00000472363 168 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 AC016559.2-201ENST00000510759 359 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 OR7H2P-201ENST00000513483 306 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 RNA5SP392-201ENST00000516905 112 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.93□□□□□ -1.46
GABPAQ06546 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.93□□□□□ -1.46
GABPAQ06546 MTCYBP13-201ENST00000578634 1093 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.93□□□□□ -1.46
GABPAQ06546 AC005377.1-201ENST00000605126 456 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 MIR6748-201ENST00000610433 71 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.93□□□□□ -1.46
GABPAQ06546 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.93□□□□□ -1.46
GABPAQ06546 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 AL022311.1-201ENST00000623726 19416 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 MFSD8-216ENST00000641147 4009 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.93□□□□□ -1.46
GABPAQ06546 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.93□□□□□ -1.46
GABPAQ06546 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
GABPAQ06546 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.92□□□□□ -1.46
GABPAQ06546 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
GABPAQ06546 TRAV35-201ENST00000390462 330 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 PRPF38AP2-201ENST00000438179 851 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.92□□□□□ -1.46
GABPAQ06546 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 AC007686.1-201ENST00000488511 463 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.92□□□□□ -1.46
GABPAQ06546 AP001521.2-201ENST00000608772 546 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 AC138627.1-204ENST00000641894 765 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.92□□□□□ -1.46
GABPAQ06546 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
GABPAQ06546 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
GABPAQ06546 AC004158.1-201ENST00000564508 4319 ntBASIC5.92□□□□□ -1.46
GABPAQ06546 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
GABPAQ06546 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
GABPAQ06546 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 RNA5SP443-201ENST00000363083 132 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.91□□□□□ -1.46
GABPAQ06546 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.91□□□□□ -1.46
GABPAQ06546 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GABPAQ06546 SNORA56-201ENST00000383966 129 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 CYB5AP4-201ENST00000396692 399 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 U3.32-201ENST00000408116 212 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 RPL12P43-201ENST00000420608 499 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 AC244033.1-201ENST00000426826 870 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 COX6CP13-201ENST00000428703 226 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 AL450023.3-201ENST00000440592 271 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 RPL36AP15-201ENST00000444514 266 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 HMGB1P4-201ENST00000455362 567 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 RPS17P2-201ENST00000461663 408 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
GABPAQ06546 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.91□□□□□ -1.46
GABPAQ06546 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.91□□□□□ -1.46
GABPAQ06546 MORF4L1P3-201ENST00000525966 950 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 AC137768.1-201ENST00000549998 553 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.91□□□□□ -1.46
GABPAQ06546 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.91□□□□□ -1.46
GABPAQ06546 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GABPAQ06546 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
GABPAQ06546 EIF1P5-201ENST00000585002 234 ntBASIC5.91□□□□□ -1.46
GABPAQ06546 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.91□□□□□ -1.46
GABPAQ06546 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms