Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 NPM1P40-201ENST00000412758 733 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 AC021876.1-201ENST00000425959 359 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 AC124944.2-201ENST00000429866 1242 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 NPM1P48-201ENST00000436002 853 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 RHOT1P3-201ENST00000436571 331 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 RPL34P20-201ENST00000442771 351 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 RPL21P133-201ENST00000443666 476 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC073072.2-201ENST00000447425 348 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 RN7SL189P-201ENST00000468631 289 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 RN7SL481P-201ENST00000477764 299 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.91□□□□□ -1.46
CCNA1P78396 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 RAB9BP1-201ENST00000519581 626 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.91□□□□□ -1.46
CCNA1P78396 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 MTCO1P1-201ENST00000624263 1081 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 MIR7641-1-201ENST00000627518 61 ntBASIC5.91□□□□□ -1.46
CCNA1P78396 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.91□□□□□ -1.46
CCNA1P78396 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.91□□□□□ -1.46
CCNA1P78396 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCNA1P78396 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCNA1P78396 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNA1P78396 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNA1P78396 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCNA1P78396 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 RNU1-74P-201ENST00000384108 171 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC011753.3-201ENST00000443436 406 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 AL137845.2-201ENST00000444292 988 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 snoU13.29-201ENST00000459370 104 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNA1P78396 RN7SL319P-201ENST00000480656 221 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 RN7SL346P-201ENST00000491561 294 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC008897.1-201ENST00000494006 347 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCNA1P78396 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.9□□□□□ -1.46
CCNA1P78396 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.9□□□□□ -1.46
CCNA1P78396 KCTD9P6-201ENST00000522306 950 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 UBE2FP2-201ENST00000566646 462 ntBASIC5.9□□□□□ -1.46
CCNA1P78396 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.9□□□□□ -1.46
CCNA1P78396 AL929601.4-201ENST00000613011 1341 ntBASIC5.9□□□□□ -1.47
CCNA1P78396 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.9□□□□□ -1.47
CCNA1P78396 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNA1P78396 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNA1P78396 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNA1P78396 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNA1P78396 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCNA1P78396 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.89□□□□□ -1.47
CCNA1P78396 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCNA1P78396 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CCNA1P78396 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.89□□□□□ -1.47
CCNA1P78396 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.89□□□□□ -1.47
CCNA1P78396 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNA1P78396 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNA1P78396 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCNA1P78396 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CCNA1P78396 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCNA1P78396 AC245100.2-201ENST00000454544 1679 ntBASIC5.89□□□□□ -1.47
CCNA1P78396 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNA1P78396 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.89□□□□□ -1.47
CCNA1P78396 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCNA1P78396 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CCNA1P78396 RN7SKP113-201ENST00000363891 295 ntBASIC5.89□□□□□ -1.47
CCNA1P78396 AL021331.1-201ENST00000402817 582 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms