Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RN7SL290P-201ENST00000578661 300 ntBASIC4.95□□□□□ -1.62
VSX2P58304 AC006272.2-201ENST00000594725 163 ntBASIC4.95□□□□□ -1.62
VSX2P58304 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.95□□□□□ -1.62
VSX2P58304 AL445222.1-201ENST00000607259 628 ntBASIC4.95□□□□□ -1.62
VSX2P58304 AC037198.3-201ENST00000616754 526 ntBASIC4.95□□□□□ -1.62
VSX2P58304 AC118658.2-201ENST00000618697 459 ntBASIC4.95□□□□□ -1.62
VSX2P58304 AC015660.5-201ENST00000623238 564 ntBASIC4.95□□□□□ -1.62
VSX2P58304 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.95□□□□□ -1.62
VSX2P58304 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VSX2P58304 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 RNA5SP223-201ENST00000365174 120 ntBASIC4.94□□□□□ -1.62
VSX2P58304 RNU1-74P-201ENST00000384108 171 ntBASIC4.94□□□□□ -1.62
VSX2P58304 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.94□□□□□ -1.62
VSX2P58304 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.94□□□□□ -1.62
VSX2P58304 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.94□□□□□ -1.62
VSX2P58304 AC090114.3-201ENST00000479267 829 ntBASIC4.94□□□□□ -1.62
VSX2P58304 RN7SL814P-201ENST00000487715 300 ntBASIC4.94□□□□□ -1.62
VSX2P58304 RPL32P9-201ENST00000487963 407 ntBASIC4.94□□□□□ -1.62
VSX2P58304 AC109462.1-201ENST00000491087 368 ntBASIC4.94□□□□□ -1.62
VSX2P58304 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 IMPA1P1-201ENST00000510718 842 ntBASIC4.94□□□□□ -1.62
VSX2P58304 AC092490.3-201ENST00000545370 572 ntBASIC4.94□□□□□ -1.62
VSX2P58304 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 AC008536.1-201ENST00000602872 669 ntBASIC4.94□□□□□ -1.62
VSX2P58304 MIR6730-201ENST00000622213 67 ntBASIC4.94□□□□□ -1.62
VSX2P58304 LINC01739-205ENST00000641890 573 ntBASIC4.94□□□□□ -1.62
VSX2P58304 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VSX2P58304 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.94□□□□□ -1.62
VSX2P58304 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
VSX2P58304 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VSX2P58304 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
VSX2P58304 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
VSX2P58304 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VSX2P58304 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 AC093162.1-201ENST00000419682 124 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.93□□□□□ -1.62
VSX2P58304 AC007394.1-201ENST00000421941 531 ntBASIC4.93□□□□□ -1.62
VSX2P58304 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 GAPDHP58-201ENST00000438477 1006 ntBASIC4.93□□□□□ -1.62
VSX2P58304 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.93□□□□□ -1.62
VSX2P58304 CEACAMP7-201ENST00000444105 496 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC073850.1-201ENST00000449243 255 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.93□□□□□ -1.62
VSX2P58304 RPL7AP6-201ENST00000477943 801 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC020779.1-201ENST00000478757 796 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC091544.1-201ENST00000484702 348 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.93□□□□□ -1.62
VSX2P58304 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.93□□□□□ -1.62
VSX2P58304 AC068993.1-201ENST00000546724 589 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.93□□□□□ -1.62
VSX2P58304 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.93□□□□□ -1.62
VSX2P58304 AC087763.1-201ENST00000603391 286 ntBASIC4.93□□□□□ -1.62
VSX2P58304 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.93□□□□□ -1.62
VSX2P58304 AP005131.7-201ENST00000610087 611 ntBASIC4.93□□□□□ -1.62
VSX2P58304 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 MIR6839-201ENST00000620425 113 ntBASIC4.93□□□□□ -1.62
VSX2P58304 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.93□□□□□ -1.62
VSX2P58304 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.93□□□□□ -1.62
VSX2P58304 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VSX2P58304 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 ADAM5-202ENST00000399789 1942 ntBASIC4.93□□□□□ -1.62
VSX2P58304 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VSX2P58304 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VSX2P58304 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.93□□□□□ -1.62
VSX2P58304 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
VSX2P58304 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.92□□□□□ -1.62
VSX2P58304 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms