Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
RIPK4P57078 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.61□□□□□ -1.35
RIPK4P57078 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RIPK4P57078 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RIPK4P57078 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 MIPEPP2-201ENST00000422560 1819 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RIPK4P57078 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.6□□□□□ -1.35
RIPK4P57078 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 VN1R54P-201ENST00000435210 1049 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 RPS29P9-201ENST00000440360 171 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 TXNP5-201ENST00000441043 315 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC004980.3-201ENST00000447046 365 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 HMGB1P4-201ENST00000455362 567 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC140172.1-201ENST00000502928 141 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.6□□□□□ -1.35
RIPK4P57078 AC008033.2-201ENST00000542626 177 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 NDUFB4P11-201ENST00000560510 395 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC040958.1-201ENST00000561102 201 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.6□□□□□ -1.35
RIPK4P57078 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 AC024940.4-201ENST00000605507 246 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 AC112694.2-201ENST00000623697 768 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
RIPK4P57078 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.6□□□□□ -1.35
RIPK4P57078 SCARNA15-201ENST00000607520 4325 ntBASIC6.6□□□□□ -1.35
RIPK4P57078 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIPK4P57078 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 AC112255.1-201ENST00000624070 2493 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
RIPK4P57078 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
RIPK4P57078 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.59□□□□□ -1.35
RIPK4P57078 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.59□□□□□ -1.35
RIPK4P57078 SNORA70.10-201ENST00000384515 134 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 RN7SKP16-201ENST00000410180 299 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 CHEK2P3-201ENST00000416118 248 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 AF186996.5-201ENST00000418098 904 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.59□□□□□ -1.35
RIPK4P57078 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.59□□□□□ -1.35
RIPK4P57078 AL450023.3-201ENST00000440592 271 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 AL137845.2-201ENST00000444292 988 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 RN7SL319P-201ENST00000480656 221 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.59□□□□□ -1.35
RIPK4P57078 RNU6-513P-201ENST00000516104 104 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.59□□□□□ -1.35
RIPK4P57078 AC011840.5-201ENST00000582125 771 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.59□□□□□ -1.35
RIPK4P57078 AC073575.2-201ENST00000614212 627 ntBASIC6.59□□□□□ -1.35
RIPK4P57078 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIPK4P57078 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.59□□□□□ -1.35
RIPK4P57078 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.59□□□□□ -1.36
RIPK4P57078 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RIPK4P57078 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RIPK4P57078 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RIPK4P57078 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.58□□□□□ -1.36
RIPK4P57078 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RIPK4P57078 IRF5P1-201ENST00000504852 2164 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIPK4P57078 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RIPK4P57078 AC022417.1-201ENST00000624768 1303 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 AC004817.4-201ENST00000602396 3625 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 SNORA11B-201ENST00000408175 129 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.58□□□□□ -1.36
RIPK4P57078 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.58□□□□□ -1.36
RIPK4P57078 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.58□□□□□ -1.36
RIPK4P57078 SUMO2P1-206ENST00000445436 284 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.58□□□□□ -1.36
RIPK4P57078 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.58□□□□□ -1.36
RIPK4P57078 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.58□□□□□ -1.36
RIPK4P57078 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.58□□□□□ -1.36
RIPK4P57078 AP000676.2-201ENST00000529711 301 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 AC005000.1-201ENST00000536192 288 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.58□□□□□ -1.36
RIPK4P57078 AL512310.9-201ENST00000553311 948 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 MIR4436B2-201ENST00000581415 91 ntBASIC6.58□□□□□ -1.36
RIPK4P57078 MIR4436B1-201ENST00000583272 91 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms