Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 GVINP1-202ENST00000531871 7271 ntBASIC5.73□□□□□ -1.49
VCPP55072 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VCPP55072 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 SNORD56.6-201ENST00000384569 71 ntBASIC5.72□□□□□ -1.49
VCPP55072 PPIAP9-201ENST00000403866 498 ntBASIC5.72□□□□□ -1.49
VCPP55072 HMGN2P27-201ENST00000427352 270 ntBASIC5.72□□□□□ -1.49
VCPP55072 AL136231.1-201ENST00000429407 730 ntBASIC5.72□□□□□ -1.49
VCPP55072 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 AC011753.3-201ENST00000443436 406 ntBASIC5.72□□□□□ -1.49
VCPP55072 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 ATP5J2P6-201ENST00000565203 266 ntBASIC5.72□□□□□ -1.49
VCPP55072 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 AC027216.1-201ENST00000577726 685 ntBASIC5.72□□□□□ -1.49
VCPP55072 AC234771.5-201ENST00000600161 514 ntBASIC5.72□□□□□ -1.49
VCPP55072 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VCPP55072 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VCPP55072 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.72□□□□□ -1.49
VCPP55072 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.49
VCPP55072 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.71□□□□□ -1.49
VCPP55072 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
VCPP55072 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VCPP55072 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
VCPP55072 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VCPP55072 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 RNA5SP123-201ENST00000363244 119 ntBASIC5.71□□□□□ -1.5
VCPP55072 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 SNORA67-201ENST00000384423 137 ntBASIC5.71□□□□□ -1.5
VCPP55072 RNU2-22P-201ENST00000411266 212 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC002524.1-201ENST00000411687 547 ntBASIC5.71□□□□□ -1.5
VCPP55072 USP9YP9-201ENST00000429406 715 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC007537.2-201ENST00000472093 511 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.71□□□□□ -1.5
VCPP55072 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.71□□□□□ -1.5
VCPP55072 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VCPP55072 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.71□□□□□ -1.5
VCPP55072 RN7SKP147-201ENST00000517154 244 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.71□□□□□ -1.5
VCPP55072 AC078878.1-201ENST00000539832 958 ntBASIC5.71□□□□□ -1.5
VCPP55072 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.71□□□□□ -1.5
VCPP55072 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.71□□□□□ -1.5
VCPP55072 AP005403.1-201ENST00000579720 229 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.71□□□□□ -1.5
VCPP55072 AL356608.1-201ENST00000610034 820 ntBASIC5.71□□□□□ -1.5
VCPP55072 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.71□□□□□ -1.5
VCPP55072 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VCPP55072 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
VCPP55072 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.71□□□□□ -1.5
VCPP55072 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.71□□□□□ -1.5
VCPP55072 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
VCPP55072 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VCPP55072 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
VCPP55072 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 RN7SKP6-201ENST00000364795 319 ntBASIC5.7□□□□□ -1.5
VCPP55072 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VCPP55072 RNA5SP187-201ENST00000384400 119 ntBASIC5.7□□□□□ -1.5
VCPP55072 MIR551A-201ENST00000385042 96 ntBASIC5.7□□□□□ -1.5
VCPP55072 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.7□□□□□ -1.5
VCPP55072 SNORA81-201ENST00000408493 178 ntBASIC5.7□□□□□ -1.5
VCPP55072 RNA5SP487-201ENST00000410186 122 ntBASIC5.7□□□□□ -1.5
VCPP55072 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.7□□□□□ -1.5
VCPP55072 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms