Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC012414.2-201ENST00000559474 187 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC092868.3-201ENST00000560515 784 ntBASIC4.02□□□□□ -1.77
APOC4P55056 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.02□□□□□ -1.77
APOC4P55056 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
APOC4P55056 AC015802.5-201ENST00000607478 399 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC000068.2-201ENST00000608816 460 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC084036.1-201ENST00000609190 508 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.02□□□□□ -1.77
APOC4P55056 AL121612.2-201ENST00000612261 482 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC003001.2-201ENST00000616294 831 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AL356274.1-201ENST00000617064 410 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.02□□□□□ -1.77
APOC4P55056 uc_338.7-201ENST00000621834 124 ntBASIC4.02□□□□□ -1.77
APOC4P55056 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.02□□□□□ -1.77
APOC4P55056 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.02□□□□□ -1.77
APOC4P55056 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.02□□□□□ -1.77
APOC4P55056 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.02□□□□□ -1.77
APOC4P55056 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
APOC4P55056 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
APOC4P55056 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
APOC4P55056 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.02□□□□□ -1.77
APOC4P55056 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
APOC4P55056 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.02□□□□□ -1.77
APOC4P55056 ZNF733P-202ENST00000444809 1573 ntBASIC4.02□□□□□ -1.77
APOC4P55056 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.02□□□□□ -1.77
APOC4P55056 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
APOC4P55056 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 AL590763.1-201ENST00000398297 1545 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AP000473.2-201ENST00000602659 1537 ntBASIC4.01□□□□□ -1.77
APOC4P55056 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.01□□□□□ -1.77
APOC4P55056 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 KYNUP3-201ENST00000574386 1341 ntBASIC4.01□□□□□ -1.77
APOC4P55056 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 OR9K1P-201ENST00000326513 941 ntBASIC4.01□□□□□ -1.77
APOC4P55056 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 AL589826.1-201ENST00000340697 249 ntBASIC4.01□□□□□ -1.77
APOC4P55056 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 BMS1P3-201ENST00000372011 932 ntBASIC4.01□□□□□ -1.77
APOC4P55056 SNORA67-201ENST00000384423 137 ntBASIC4.01□□□□□ -1.77
APOC4P55056 SNORA68.2-201ENST00000391263 128 ntBASIC4.01□□□□□ -1.77
APOC4P55056 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.01□□□□□ -1.77
APOC4P55056 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.01□□□□□ -1.77
APOC4P55056 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 AC007161.1-204ENST00000423039 460 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AC017019.1-201ENST00000426129 261 ntBASIC4.01□□□□□ -1.77
APOC4P55056 GSTM5P1-201ENST00000434751 660 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AL627308.1-201ENST00000435693 821 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.01□□□□□ -1.77
APOC4P55056 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.01□□□□□ -1.77
APOC4P55056 AL157884.3-201ENST00000448273 1184 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.01□□□□□ -1.77
APOC4P55056 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 RPS26P39-201ENST00000469206 341 ntBASIC4.01□□□□□ -1.77
APOC4P55056 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 COPS8P2-201ENST00000473228 627 ntBASIC4.01□□□□□ -1.77
APOC4P55056 RN7SL809P-201ENST00000482040 297 ntBASIC4.01□□□□□ -1.77
APOC4P55056 RN7SL284P-201ENST00000498823 275 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.01□□□□□ -1.77
APOC4P55056 ST13P12-201ENST00000508958 1094 ntBASIC4.01□□□□□ -1.77
APOC4P55056 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 RN7SKP253-201ENST00000516424 309 ntBASIC4.01□□□□□ -1.77
APOC4P55056 snoU109.6-201ENST00000516831 118 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 HAUS8P1-201ENST00000549005 542 ntBASIC4.01□□□□□ -1.77
APOC4P55056 BLZF2P-201ENST00000553776 1130 ntBASIC4.01□□□□□ -1.77
APOC4P55056 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.01□□□□□ -1.77
APOC4P55056 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 AC013244.1-201ENST00000604279 193 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AC096553.1-201ENST00000605169 829 ntBASIC4.01□□□□□ -1.77
APOC4P55056 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.01□□□□□ -1.77
APOC4P55056 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.01□□□□□ -1.77
APOC4P55056 AP002967.1-201ENST00000624203 539 ntBASIC4.01□□□□□ -1.77
APOC4P55056 SAMMSON-227ENST00000642114 1199 ntBASIC4.01□□□□□ -1.77
APOC4P55056 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.01□□□□□ -1.77
APOC4P55056 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.01□□□□□ -1.77
APOC4P55056 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.01□□□□□ -1.77
APOC4P55056 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
APOC4P55056 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
APOC4P55056 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms