Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.44□□□□□ -1.38
EPHB3P54753 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 AP000641.1-201ENST00000531988 1639 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
EPHB3P54753 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 Y_RNA.553-201ENST00000384670 102 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 ATP5F1P3-201ENST00000397213 657 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 RSL24D1P4-201ENST00000400938 484 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AL096829.1-201ENST00000413677 457 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.44□□□□□ -1.38
EPHB3P54753 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC245884.2-201ENST00000426257 404 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 RPL23AP19-201ENST00000436229 369 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 PTGES3P1-201ENST00000439531 483 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC092641.1-201ENST00000440229 772 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 RPL5P12-201ENST00000477071 851 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 RNA5SP438-201ENST00000516561 112 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC6.44□□□□□ -1.38
EPHB3P54753 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
EPHB3P54753 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC012146.2-201ENST00000576545 416 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC027229.1-201ENST00000583887 253 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.44□□□□□ -1.38
EPHB3P54753 AC106791.2-201ENST00000604680 391 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 MIR6793-201ENST00000612376 63 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.44□□□□□ -1.38
EPHB3P54753 AL136228.1-201ENST00000622221 319 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 MIR4302-201ENST00000638058 60 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 FP325313.1-201ENST00000638228 703 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 MAPK10-365ENST00000641902 3825 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 AL359715.3-201ENST00000569267 2123 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.44□□□□□ -1.38
EPHB3P54753 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.44□□□□□ -1.38
EPHB3P54753 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
EPHB3P54753 KARSP1-201ENST00000451871 1752 ntBASIC6.44□□□□□ -1.38
EPHB3P54753 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.43□□□□□ -1.38
EPHB3P54753 UGT2B27P-201ENST00000505092 1620 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
EPHB3P54753 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
EPHB3P54753 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.43□□□□□ -1.38
EPHB3P54753 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
EPHB3P54753 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 RNA5SP333-201ENST00000363466 118 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 RNA5SP334-201ENST00000364825 118 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
EPHB3P54753 AL031985.1-201ENST00000392713 418 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 ST13P16-201ENST00000401760 781 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 AL590084.1-201ENST00000407885 387 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.43□□□□□ -1.38
EPHB3P54753 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 DPRXP1-201ENST00000426312 460 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 OR2B8P-201ENST00000432841 938 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 MTCO1P52-201ENST00000433928 531 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.43□□□□□ -1.38
EPHB3P54753 FGF7P5-201ENST00000441829 291 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 AC005297.1-201ENST00000444765 862 ntBASIC6.43□□□□□ -1.38
EPHB3P54753 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
EPHB3P54753 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.43□□□□□ -1.38
EPHB3P54753 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.43□□□□□ -1.38
EPHB3P54753 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms