Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 OR11H2-202ENST00000641517 1085 ntBASIC5.93□□□□□ -1.46
COPAP53621 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.93□□□□□ -1.46
COPAP53621 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.93□□□□□ -1.46
COPAP53621 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COPAP53621 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPAP53621 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.93□□□□□ -1.46
COPAP53621 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 MTND5P11-201ENST00000511037 1812 ntBASIC5.92□□□□□ -1.46
COPAP53621 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.92□□□□□ -1.46
COPAP53621 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 RNU6-252P-201ENST00000363232 107 ntBASIC5.92□□□□□ -1.46
COPAP53621 RNU6-796P-201ENST00000391086 107 ntBASIC5.92□□□□□ -1.46
COPAP53621 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 AL354766.1-201ENST00000423396 542 ntBASIC5.92□□□□□ -1.46
COPAP53621 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.92□□□□□ -1.46
COPAP53621 AL662874.1-201ENST00000426065 230 ntBASIC5.92□□□□□ -1.46
COPAP53621 HMGB3P24-201ENST00000433260 622 ntBASIC5.92□□□□□ -1.46
COPAP53621 AC093716.1-201ENST00000435923 377 ntBASIC5.92□□□□□ -1.46
COPAP53621 GAPDHP48-201ENST00000436626 961 ntBASIC5.92□□□□□ -1.46
COPAP53621 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 LRRC37A14P-201ENST00000452297 462 ntBASIC5.92□□□□□ -1.46
COPAP53621 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 RN7SL466P-201ENST00000497546 295 ntBASIC5.92□□□□□ -1.46
COPAP53621 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.92□□□□□ -1.46
COPAP53621 AP003066.2-201ENST00000529375 555 ntBASIC5.92□□□□□ -1.46
COPAP53621 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 AC139697.1-201ENST00000548429 745 ntBASIC5.92□□□□□ -1.46
COPAP53621 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 FO393422.1-201ENST00000603908 708 ntBASIC5.92□□□□□ -1.46
COPAP53621 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 AL121652.1-201ENST00000608851 448 ntBASIC5.92□□□□□ -1.46
COPAP53621 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 AC079776.5-201ENST00000641920 211 ntBASIC5.92□□□□□ -1.46
COPAP53621 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COPAP53621 AC106754.1-201ENST00000562632 1513 ntBASIC5.92□□□□□ -1.46
COPAP53621 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COPAP53621 AC114774.1-201ENST00000507410 1770 ntBASIC5.92□□□□□ -1.46
COPAP53621 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.92□□□□□ -1.46
COPAP53621 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 AL645568.2-201ENST00000432815 1337 ntBASIC5.92□□□□□ -1.46
COPAP53621 AL627171.1-201ENST00000618845 1308 ntBASIC5.92□□□□□ -1.46
COPAP53621 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COPAP53621 TRIM51GP-201ENST00000534741 1350 ntBASIC5.92□□□□□ -1.46
COPAP53621 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
COPAP53621 AC007382.1-201ENST00000624376 2618 ntBASIC5.91□□□□□ -1.46
COPAP53621 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 AC144833.1-201ENST00000567953 4089 ntBASIC5.91□□□□□ -1.46
COPAP53621 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 RNA5SP132-201ENST00000364725 118 ntBASIC5.91□□□□□ -1.46
COPAP53621 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.91□□□□□ -1.46
COPAP53621 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 OR3A2-201ENST00000408891 1076 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 MYL6P5-201ENST00000412707 459 ntBASIC5.91□□□□□ -1.46
COPAP53621 RPA2P2-201ENST00000419698 796 ntBASIC5.91□□□□□ -1.46
COPAP53621 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 MTCO1P43-201ENST00000431831 488 ntBASIC5.91□□□□□ -1.46
COPAP53621 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.91□□□□□ -1.46
COPAP53621 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 RPS27P5-201ENST00000444247 244 ntBASIC5.91□□□□□ -1.46
COPAP53621 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.91□□□□□ -1.46
COPAP53621 AC023512.1-201ENST00000444513 499 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COPAP53621 AL157777.1-201ENST00000468100 304 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC099521.1-201ENST00000482557 334 ntBASIC5.91□□□□□ -1.46
COPAP53621 RN7SL423P-201ENST00000486202 304 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 SNORA43.3-201ENST00000517240 103 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms