Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.94□□□□□ -1.46
COPB1P53618 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.94□□□□□ -1.46
COPB1P53618 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.94□□□□□ -1.46
COPB1P53618 AC010547.7-201ENST00000570323 333 ntBASIC5.94□□□□□ -1.46
COPB1P53618 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC010503.3-201ENST00000594355 540 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 AC004775.1-201ENST00000607389 753 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AC018926.1-201ENST00000616335 435 ntBASIC5.94□□□□□ -1.46
COPB1P53618 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 AC099654.8-201ENST00000637757 681 ntBASIC5.94□□□□□ -1.46
COPB1P53618 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.94□□□□□ -1.46
COPB1P53618 OR6C71P-202ENST00000641886 1107 ntBASIC5.94□□□□□ -1.46
COPB1P53618 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.94□□□□□ -1.46
COPB1P53618 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
COPB1P53618 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 AL929601.4-201ENST00000613011 1341 ntBASIC5.94□□□□□ -1.46
COPB1P53618 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COPB1P53618 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.94□□□□□ -1.46
COPB1P53618 ADAM5-202ENST00000399789 1942 ntBASIC5.93□□□□□ -1.46
COPB1P53618 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 RNU6-1331P-201ENST00000363658 106 ntBASIC5.93□□□□□ -1.46
COPB1P53618 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 SNORA16A-201ENST00000384342 137 ntBASIC5.93□□□□□ -1.46
COPB1P53618 U3.23-201ENST00000391132 200 ntBASIC5.93□□□□□ -1.46
COPB1P53618 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 RPS3AP2-201ENST00000407190 754 ntBASIC5.93□□□□□ -1.46
COPB1P53618 SNORA11B-201ENST00000408175 129 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 RPL12P9-201ENST00000412942 488 ntBASIC5.93□□□□□ -1.46
COPB1P53618 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 AC114973.1-201ENST00000429057 632 ntBASIC5.93□□□□□ -1.46
COPB1P53618 MTCO1P45-201ENST00000431457 267 ntBASIC5.93□□□□□ -1.46
COPB1P53618 MOB1AP2-201ENST00000446060 614 ntBASIC5.93□□□□□ -1.46
COPB1P53618 RPL31P15-201ENST00000449770 338 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC011476.1-201ENST00000466725 307 ntBASIC5.93□□□□□ -1.46
COPB1P53618 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 RN7SL174P-201ENST00000475578 289 ntBASIC5.93□□□□□ -1.46
COPB1P53618 NAMPTP2-201ENST00000505629 1115 ntBASIC5.93□□□□□ -1.46
COPB1P53618 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 EIF3KP3-201ENST00000514461 639 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.93□□□□□ -1.46
COPB1P53618 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 NANOGNBP2-201ENST00000544753 553 ntBASIC5.93□□□□□ -1.46
COPB1P53618 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.93□□□□□ -1.46
COPB1P53618 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.93□□□□□ -1.46
COPB1P53618 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 PRPF19P1-201ENST00000584766 898 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
COPB1P53618 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC023762.1-201ENST00000603280 584 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC100767.2-201ENST00000604840 693 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC245389.2-201ENST00000616023 576 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC242843.1-201ENST00000618702 573 ntBASIC5.93□□□□□ -1.46
COPB1P53618 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 AC129915.3-201ENST00000634128 948 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC099654.9-201ENST00000637055 678 ntBASIC5.93□□□□□ -1.46
COPB1P53618 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COPB1P53618 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COPB1P53618 AL353796.1-201ENST00000561542 3241 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AL132656.3-201ENST00000606384 1595 ntBASIC5.93□□□□□ -1.46
COPB1P53618 AC009501.3-201ENST00000605001 1352 ntBASIC5.93□□□□□ -1.46
COPB1P53618 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COPB1P53618 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.92□□□□□ -1.46
COPB1P53618 OR52B3P-201ENST00000314715 928 ntBASIC5.92□□□□□ -1.46
COPB1P53618 SNORA51.1-201ENST00000363243 140 ntBASIC5.92□□□□□ -1.46
COPB1P53618 AL031985.1-201ENST00000392713 418 ntBASIC5.92□□□□□ -1.46
COPB1P53618 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.92□□□□□ -1.46
COPB1P53618 COX5BP7-201ENST00000414780 274 ntBASIC5.92□□□□□ -1.46
COPB1P53618 TRIM60P17-201ENST00000415181 719 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms