Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.07□□□□□ -1.28
MSH6P52701 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC7.07□□□□□ -1.28
MSH6P52701 NRBF2P3-201ENST00000432731 865 ntBASIC7.07□□□□□ -1.28
MSH6P52701 AC005154.2-201ENST00000438110 379 ntBASIC7.07□□□□□ -1.28
MSH6P52701 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 AC138701.1-201ENST00000524329 714 ntBASIC7.07□□□□□ -1.28
MSH6P52701 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.07□□□□□ -1.28
MSH6P52701 AC000095.2-202ENST00000637415 154 ntBASIC7.07□□□□□ -1.28
MSH6P52701 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
MSH6P52701 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.06□□□□□ -1.28
MSH6P52701 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
MSH6P52701 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 AC104964.3-201ENST00000606115 2860 ntBASIC7.06□□□□□ -1.28
MSH6P52701 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.06□□□□□ -1.28
MSH6P52701 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
MSH6P52701 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
MSH6P52701 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
MSH6P52701 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.06□□□□□ -1.28
MSH6P52701 AC021876.1-201ENST00000425959 359 ntBASIC7.06□□□□□ -1.28
MSH6P52701 NPM1P33-201ENST00000438918 872 ntBASIC7.06□□□□□ -1.28
MSH6P52701 SLC25A18P1-201ENST00000449385 454 ntBASIC7.06□□□□□ -1.28
MSH6P52701 SCARNA20.4-201ENST00000516969 131 ntBASIC7.06□□□□□ -1.28
MSH6P52701 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.06□□□□□ -1.28
MSH6P52701 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.06□□□□□ -1.28
MSH6P52701 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
MSH6P52701 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.06□□□□□ -1.28
MSH6P52701 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.05□□□□□ -1.28
MSH6P52701 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
MSH6P52701 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
MSH6P52701 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MSH6P52701 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.05□□□□□ -1.28
MSH6P52701 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MSH6P52701 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.05□□□□□ -1.28
MSH6P52701 BMS1P19-201ENST00000433925 393 ntBASIC7.05□□□□□ -1.28
MSH6P52701 CEACAMP6-201ENST00000452007 574 ntBASIC7.05□□□□□ -1.28
MSH6P52701 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.05□□□□□ -1.28
MSH6P52701 RNA5SP464-201ENST00000516251 108 ntBASIC7.05□□□□□ -1.28
MSH6P52701 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.05□□□□□ -1.28
MSH6P52701 AC012339.2-201ENST00000523996 453 ntBASIC7.05□□□□□ -1.28
MSH6P52701 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.05□□□□□ -1.28
MSH6P52701 AC023575.1-201ENST00000580510 358 ntBASIC7.05□□□□□ -1.28
MSH6P52701 AC005377.1-201ENST00000605126 456 ntBASIC7.05□□□□□ -1.28
MSH6P52701 MIR6853-201ENST00000619642 74 ntBASIC7.05□□□□□ -1.28
MSH6P52701 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
MSH6P52701 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
MSH6P52701 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
MSH6P52701 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 AC104118.1-201ENST00000607625 1589 ntBASIC7.04□□□□□ -1.28
MSH6P52701 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
MSH6P52701 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 RNU1-74P-201ENST00000384108 171 ntBASIC7.04□□□□□ -1.28
MSH6P52701 AL049697.2-201ENST00000403708 294 ntBASIC7.04□□□□□ -1.28
MSH6P52701 GTF2IP5-201ENST00000414608 731 ntBASIC7.04□□□□□ -1.28
MSH6P52701 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 AL732292.1-201ENST00000426692 226 ntBASIC7.04□□□□□ -1.28
MSH6P52701 BX323845.1-201ENST00000432417 179 ntBASIC7.04□□□□□ -1.28
MSH6P52701 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 AC128716.1-201ENST00000475129 166 ntBASIC7.04□□□□□ -1.28
MSH6P52701 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 OR5M2P-201ENST00000529003 936 ntBASIC7.04□□□□□ -1.28
MSH6P52701 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.04□□□□□ -1.28
MSH6P52701 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.04□□□□□ -1.28
MSH6P52701 EIF1P5-201ENST00000585002 234 ntBASIC7.04□□□□□ -1.28
MSH6P52701 AC015712.7-201ENST00000615211 635 ntBASIC7.04□□□□□ -1.28
MSH6P52701 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.04□□□□□ -1.28
MSH6P52701 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.04□□□□□ -1.28
MSH6P52701 AC015799.1-201ENST00000622996 3122 ntBASIC7.04□□□□□ -1.28
MSH6P52701 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
MSH6P52701 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
MSH6P52701 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MSH6P52701 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
MSH6P52701 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
MSH6P52701 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
MSH6P52701 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.03□□□□□ -1.28
MSH6P52701 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MSH6P52701 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms