Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
GTF2A1P52655 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GTF2A1P52655 AC022306.1-201ENST00000560489 1562 ntBASIC4.95□□□□□ -1.62
GTF2A1P52655 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.94□□□□□ -1.62
GTF2A1P52655 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
GTF2A1P52655 GAPDHP24-201ENST00000328713 983 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RNFT1P3-201ENST00000340898 1052 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF2A1P52655 AL159987.1-201ENST00000347911 293 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RNU6-178P-201ENST00000384631 104 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RN7SKP38-201ENST00000410782 309 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AL590609.2-201ENST00000421430 368 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF2A1P52655 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.94□□□□□ -1.62
GTF2A1P52655 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
GTF2A1P52655 MRPL48P1-201ENST00000445390 636 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 BX842559.2-201ENST00000451418 605 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AL358876.1-201ENST00000453364 1075 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 SEPT14P1-201ENST00000458703 648 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AC004890.1-201ENST00000461005 181 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RN7SL205P-201ENST00000490174 284 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RN7SL57P-201ENST00000493687 290 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AC104971.1-201ENST00000495117 578 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF2A1P52655 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RN7SKP238-201ENST00000516483 249 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 RN7SKP35-201ENST00000517210 151 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF2A1P52655 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF2A1P52655 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF2A1P52655 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF2A1P52655 H3F3BP2-201ENST00000583907 357 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 AC004825.2-201ENST00000616634 455 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 MIR4727-201ENST00000622232 55 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.94□□□□□ -1.62
GTF2A1P52655 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF2A1P52655 DDX18P5-201ENST00000534547 1306 ntBASIC4.94□□□□□ -1.62
GTF2A1P52655 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GTF2A1P52655 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.93□□□□□ -1.62
GTF2A1P52655 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
GTF2A1P52655 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 RN7SKP153-201ENST00000365026 316 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 SNORA51.9-201ENST00000384295 124 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 MIR3074-201ENST00000384885 81 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 U3.32-201ENST00000408116 212 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RN7SKP146-201ENST00000410242 334 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 OR51A6P-201ENST00000418680 1004 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.93□□□□□ -1.62
GTF2A1P52655 RPSAP32-201ENST00000432681 526 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 TUBB4BP6-201ENST00000437576 479 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RPL7P28-201ENST00000437739 740 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RPL12P49-201ENST00000441100 121 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AL161636.2-201ENST00000445179 927 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.93□□□□□ -1.62
GTF2A1P52655 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.93□□□□□ -1.62
GTF2A1P52655 HMGB1P7-201ENST00000450921 612 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RN7SL254P-201ENST00000460609 284 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC098847.1-201ENST00000473094 348 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RN7SL809P-201ENST00000482040 297 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RN7SL570P-201ENST00000484405 292 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RPS27P20-201ENST00000492051 246 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC106822.1-201ENST00000502647 526 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 DUTP7-201ENST00000507982 486 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 PPBPP1-201ENST00000510807 373 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 HNRNPKP5-201ENST00000515300 253 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 RNA5SP228-201ENST00000516232 133 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.93□□□□□ -1.62
GTF2A1P52655 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 CYCSP28-201ENST00000534284 321 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 HSPE1P2-201ENST00000554777 306 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GTF2A1P52655 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.93□□□□□ -1.62
GTF2A1P52655 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 MT1CP-201ENST00000567054 174 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.93□□□□□ -1.62
GTF2A1P52655 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.93□□□□□ -1.62
GTF2A1P52655 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.93□□□□□ -1.62
GTF2A1P52655 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.93□□□□□ -1.62
GTF2A1P52655 AC023509.5-201ENST00000617434 807 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AL645927.2-201ENST00000618350 349 ntBASIC4.93□□□□□ -1.62
GTF2A1P52655 AC022919.1-201ENST00000624979 626 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms