Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6□□□□□ -1.45
NEK3P51956 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 RNU1-150P-201ENST00000362491 162 ntBASIC6□□□□□ -1.45
NEK3P51956 RNA5SP453-201ENST00000362503 119 ntBASIC6□□□□□ -1.45
NEK3P51956 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 RNA5SP284-201ENST00000384547 118 ntBASIC6□□□□□ -1.45
NEK3P51956 AC233289.1-201ENST00000403700 508 ntBASIC6□□□□□ -1.45
NEK3P51956 AL590290.1-201ENST00000405336 380 ntBASIC6□□□□□ -1.45
NEK3P51956 MYL6P5-201ENST00000412707 459 ntBASIC6□□□□□ -1.45
NEK3P51956 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6□□□□□ -1.45
NEK3P51956 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6□□□□□ -1.45
NEK3P51956 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 AC048351.1-201ENST00000420064 602 ntBASIC6□□□□□ -1.45
NEK3P51956 AC009506.2-201ENST00000420635 840 ntBASIC6□□□□□ -1.45
NEK3P51956 AL354766.1-201ENST00000423396 542 ntBASIC6□□□□□ -1.45
NEK3P51956 HSFY1P1-201ENST00000423928 1178 ntBASIC6□□□□□ -1.45
NEK3P51956 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6□□□□□ -1.45
NEK3P51956 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6□□□□□ -1.45
NEK3P51956 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6□□□□□ -1.45
NEK3P51956 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6□□□□□ -1.45
NEK3P51956 FO393414.1-201ENST00000428697 1184 ntBASIC6□□□□□ -1.45
NEK3P51956 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6□□□□□ -1.45
NEK3P51956 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6□□□□□ -1.45
NEK3P51956 SDC4P-201ENST00000453285 601 ntBASIC6□□□□□ -1.45
NEK3P51956 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 PSAT1P4-201ENST00000466500 526 ntBASIC6□□□□□ -1.45
NEK3P51956 AC007998.1-201ENST00000474156 672 ntBASIC6□□□□□ -1.45
NEK3P51956 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 AC008427.1-201ENST00000503102 655 ntBASIC6□□□□□ -1.45
NEK3P51956 AC026414.1-201ENST00000504046 698 ntBASIC6□□□□□ -1.45
NEK3P51956 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6□□□□□ -1.45
NEK3P51956 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 SNORD46.2-201ENST00000516021 102 ntBASIC6□□□□□ -1.45
NEK3P51956 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6□□□□□ -1.45
NEK3P51956 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6□□□□□ -1.45
NEK3P51956 AC010376.1-201ENST00000522101 334 ntBASIC6□□□□□ -1.45
NEK3P51956 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6□□□□□ -1.45
NEK3P51956 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6□□□□□ -1.45
NEK3P51956 AC009962.1-201ENST00000567327 3813 ntBASIC6□□□□□ -1.45
NEK3P51956 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6□□□□□ -1.45
NEK3P51956 AC090666.1-201ENST00000578241 445 ntBASIC6□□□□□ -1.45
NEK3P51956 OR1AB1P-201ENST00000585564 761 ntBASIC6□□□□□ -1.45
NEK3P51956 AC125494.3-201ENST00000602759 455 ntBASIC6□□□□□ -1.45
NEK3P51956 OR7A19P-201ENST00000608051 733 ntBASIC6□□□□□ -1.45
NEK3P51956 AC022960.3-201ENST00000619794 441 ntBASIC6□□□□□ -1.45
NEK3P51956 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6□□□□□ -1.45
NEK3P51956 AL356118.1-201ENST00000635272 1078 ntBASIC6□□□□□ -1.45
NEK3P51956 AC013437.2-201ENST00000639587 677 ntBASIC6□□□□□ -1.45
NEK3P51956 AC008691.1-209ENST00000642094 814 ntBASIC6□□□□□ -1.45
NEK3P51956 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 TRIM51GP-201ENST00000534741 1350 ntBASIC6□□□□□ -1.45
NEK3P51956 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NEK3P51956 AC004158.1-201ENST00000564508 4319 ntBASIC6□□□□□ -1.45
NEK3P51956 MTND4P31-201ENST00000425607 1343 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AL137100.1-201ENST00000556703 1620 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AC015689.2-201ENST00000528172 1738 ntBASIC5.99□□□□□ -1.45
NEK3P51956 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 RNU5B-4P-201ENST00000363508 111 ntBASIC5.99□□□□□ -1.45
NEK3P51956 RNU6-304P-201ENST00000364855 107 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AC092642.1-201ENST00000392417 425 ntBASIC5.99□□□□□ -1.45
NEK3P51956 RSL24D1P1-201ENST00000404972 493 ntBASIC5.99□□□□□ -1.45
NEK3P51956 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 AL445928.1-201ENST00000435545 222 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 RPS7P3-201ENST00000443360 580 ntBASIC5.99□□□□□ -1.45
NEK3P51956 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.99□□□□□ -1.45
NEK3P51956 AL935212.3-201ENST00000450729 284 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AP006222.1-205ENST00000450734 457 ntBASIC5.99□□□□□ -1.45
NEK3P51956 Z95152.1-201ENST00000453556 656 ntBASIC5.99□□□□□ -1.45
NEK3P51956 AL354710.1-201ENST00000453641 246 ntBASIC5.99□□□□□ -1.45
NEK3P51956 FRG2FP-204ENST00000453982 852 ntBASIC5.99□□□□□ -1.45
NEK3P51956 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.99□□□□□ -1.45
NEK3P51956 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NEK3P51956 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.99□□□□□ -1.45
NEK3P51956 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.99□□□□□ -1.45
NEK3P51956 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms