Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCNKAP51800 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AL139022.2-201ENST00000606934 443 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.36□□□□□ -1.55
CLCNKAP51800 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.36□□□□□ -1.55
CLCNKAP51800 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.36□□□□□ -1.55
CLCNKAP51800 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLCNKAP51800 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
CLCNKAP51800 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCNKAP51800 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC110792.3-201ENST00000595906 1614 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLCNKAP51800 MIR365B-201ENST00000362317 111 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCNKAP51800 PTGES3P2-201ENST00000407942 482 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AP000534.2-201ENST00000412729 568 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 SLC35E1P1-201ENST00000419313 864 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 DSTNP5-201ENST00000427921 523 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 CYCSP6-201ENST00000434498 302 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC105918.1-201ENST00000474399 838 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 RPS21P4-201ENST00000487122 248 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 RN7SL214P-201ENST00000487317 265 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 RPS4XP14-201ENST00000493072 781 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC024558.1-201ENST00000505008 528 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC027338.1-201ENST00000514840 825 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 EIF4A2P5-201ENST00000529914 499 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AL049779.2-201ENST00000553847 315 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC092868.3-201ENST00000560515 784 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC106785.3-201ENST00000564064 847 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC009237.13-201ENST00000603193 276 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AL133247.2-201ENST00000603236 482 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC011458.1-201ENST00000604034 617 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC067838.1-201ENST00000606064 577 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC079298.2-201ENST00000623885 459 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLCNKAP51800 AC006206.1-201ENST00000544842 3387 ntBASIC5.35□□□□□ -1.55
CLCNKAP51800 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLCNKAP51800 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLCNKAP51800 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCNKAP51800 AL121839.2-201ENST00000565058 6943 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCNKAP51800 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCNKAP51800 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCNKAP51800 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCNKAP51800 AL136520.1-201ENST00000600311 1322 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCNKAP51800 MIR133B-201ENST00000362210 119 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCNKAP51800 OR13C3-201ENST00000374781 1108 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLCNKAP51800 RNA5SP339-201ENST00000390987 122 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 AC005522.1-201ENST00000395416 346 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 AL355143.1-201ENST00000407101 841 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCNKAP51800 AL133325.1-201ENST00000421090 382 ntBASIC5.34□□□□□ -1.55
CLCNKAP51800 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms