Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN9P43378 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPN9P43378 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PTPN9P43378 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PTPN9P43378 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PTPN9P43378 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
PTPN9P43378 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
PTPN9P43378 CASC19-248ENST00000641674 1356 ntBASIC5.65□□□□□ -1.51
PTPN9P43378 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.65□□□□□ -1.51
PTPN9P43378 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.65□□□□□ -1.51
PTPN9P43378 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC132825.1-201ENST00000463573 2247 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN9P43378 HSPA8P19-201ENST00000505359 1517 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 OR13C3-201ENST00000374781 1108 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 GCNT6-201ENST00000379591 934 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 AL354692.1-201ENST00000423044 315 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 NAP1L4P2-201ENST00000425958 899 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC016772.1-201ENST00000444170 1261 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 GAPDHP25-201ENST00000447061 1001 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN9P43378 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 RPSAP39-201ENST00000467439 883 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.64□□□□□ -1.51
PTPN9P43378 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 IGKV3D-34-201ENST00000522638 302 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 AC005341.1-201ENST00000571086 708 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 ABI1P1-201ENST00000603375 1120 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC109583.2-201ENST00000617367 129 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN9P43378 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN9P43378 AC003973.3-201ENST00000624863 2822 ntBASIC5.64□□□□□ -1.51
PTPN9P43378 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN9P43378 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PTPN9P43378 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.64□□□□□ -1.51
PTPN9P43378 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTPN9P43378 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN9P43378 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN9P43378 AC010132.2-201ENST00000295493 1043 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 MIR133B-201ENST00000362210 119 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 RNA5SP335-201ENST00000363817 110 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 RNU6-650P-201ENST00000365658 111 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 MIR143-201ENST00000385300 106 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 AL353692.2-201ENST00000407054 335 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 AL355143.1-201ENST00000407101 841 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PTPN9P43378 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 AL389925.1-201ENST00000432257 728 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.63□□□□□ -1.51
PTPN9P43378 MTND2P6-201ENST00000455337 1030 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 AC092905.1-201ENST00000467527 949 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN9P43378 RPS24P16-201ENST00000497294 392 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
PTPN9P43378 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN9P43378 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PTPN9P43378 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms