Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 RNU6-599P-201ENST00000459383 107 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 RNU6-1193P-201ENST00000459461 107 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 RPL29P23-201ENST00000486188 442 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 AC098799.3-201ENST00000506095 438 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 IGBP1P5-201ENST00000507524 1000 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 SNORA81.2-201ENST00000516868 170 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 AL512347.1-201ENST00000566420 503 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AL121834.1-201ENST00000572284 509 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 EIF1P4-201ENST00000572664 335 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 EIF4A3P1-201ENST00000578499 647 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC022884.3-201ENST00000579571 248 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC008507.1-201ENST00000587506 734 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC108747.1-201ENST00000609508 535 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC12P31275 RNU6-368P-201ENST00000620928 107 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 RNU6-538P-201ENST00000622329 107 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 AC021106.3-201ENST00000623925 531 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC129502.1-201ENST00000623261 1654 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC12P31275 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 TTC41P-205ENST00000551270 3963 ntBASIC6.09□□□□□ -1.43
HOXC12P31275 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC12P31275 WBP11P1-201ENST00000562560 1931 ntBASIC6.09□□□□□ -1.44
HOXC12P31275 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC12P31275 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
HOXC12P31275 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC12P31275 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC12P31275 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
HOXC12P31275 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.09□□□□□ -1.44
HOXC12P31275 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.09□□□□□ -1.44
HOXC12P31275 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 AP003486.1-201ENST00000525716 3994 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 CDY7P-201ENST00000429883 1604 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 Y_RNA.6-201ENST00000362350 114 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RNU5D-1-201ENST00000363299 116 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RN7SKP191-201ENST00000364713 306 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC12P31275 RNU6-1300P-201ENST00000391046 108 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC092642.1-201ENST00000392417 425 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 MIR1282-201ENST00000408865 101 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RPS26P38-201ENST00000414476 348 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 RPL7AP14-201ENST00000424041 802 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RPL31P54-201ENST00000429803 370 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 TMX2P1-201ENST00000436507 708 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 USP9YP29-201ENST00000445112 563 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC12P31275 EEF1B2P3-201ENST00000447718 678 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 RPS4XP12-201ENST00000461747 709 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 RPS7P10-201ENST00000464254 603 ntBASIC6.08□□□□□ -1.44
HOXC12P31275 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC12P31275 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms