Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC091685.2-201ENST00000454924 864 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.3□□□□□ -1.72
COL8A2P25067 RPS23P1-201ENST00000491662 432 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.3□□□□□ -1.72
COL8A2P25067 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.3□□□□□ -1.72
COL8A2P25067 OR5D15P-201ENST00000531671 942 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC008033.2-201ENST00000542626 177 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.3□□□□□ -1.72
COL8A2P25067 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.3□□□□□ -1.72
COL8A2P25067 AC010503.3-201ENST00000594355 540 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC105254.2-201ENST00000603636 436 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 BNIP3P35-201ENST00000604530 490 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC116651.1-201ENST00000609724 556 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AL356608.1-201ENST00000610034 820 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AL049539.1-201ENST00000611964 459 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AP001784.1-201ENST00000624107 428 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AC002525.1-201ENST00000624392 1622 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
COL8A2P25067 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 IRF5P1-201ENST00000504852 2164 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.29□□□□□ -1.72
COL8A2P25067 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 AC007996.1-201ENST00000620414 2821 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 RN7SKP95-201ENST00000362860 303 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 SNORA66-201ENST00000384792 133 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL8A2P25067 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 AC104837.2-201ENST00000427236 424 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC006466.1-201ENST00000438721 289 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 Z80107.2-201ENST00000445127 392 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.29□□□□□ -1.72
COL8A2P25067 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.29□□□□□ -1.72
COL8A2P25067 RPS3AP53-201ENST00000454716 778 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.29□□□□□ -1.72
COL8A2P25067 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 AC097173.1-201ENST00000505862 819 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.29□□□□□ -1.72
COL8A2P25067 COX6B1P5-201ENST00000509843 249 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 IMPA1P1-201ENST00000510718 842 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 BRD9P1-201ENST00000529855 560 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AL359219.2-201ENST00000555184 348 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.29□□□□□ -1.72
COL8A2P25067 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 MIR4480-201ENST00000582492 71 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC087783.2-201ENST00000605070 562 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC100827.5-201ENST00000615883 426 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 MIR6839-201ENST00000620425 113 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 MIPEPP2-201ENST00000422560 1819 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
COL8A2P25067 AC006210.2-201ENST00000367074 1545 ntBASIC4.29□□□□□ -1.72
COL8A2P25067 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.29□□□□□ -1.72
COL8A2P25067 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
COL8A2P25067 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL8A2P25067 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.28□□□□□ -1.72
COL8A2P25067 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL8A2P25067 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms