Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC018638.3-201ENST00000461273 132 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 RPL12P30-201ENST00000488389 499 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AL035404.1-201ENST00000497982 568 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 CYP4F27P-201ENST00000514557 494 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 RN7SKP35-201ENST00000517210 151 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC7.42□□□□□ -1.22
ERCC3P19447 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.42□□□□□ -1.22
ERCC3P19447 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC122134.1-201ENST00000565664 1104 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 BPTFP1-201ENST00000579209 492 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC090616.2-202ENST00000584248 222 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC015818.6-201ENST00000584274 634 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC122108.2-201ENST00000611946 526 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC023509.5-201ENST00000617434 807 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC069209.1-201ENST00000619282 651 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC079248.2-201ENST00000623779 326 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 MIR4278-201ENST00000636094 69 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 ATE1-AS1-202ENST00000636460 506 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
ERCC3P19447 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC005539.1-201ENST00000443768 1479 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 LYARP1-201ENST00000436977 1501 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
ERCC3P19447 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC3P19447 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC3P19447 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 AC009120.2-204ENST00000621548 2032 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
ERCC3P19447 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC3P19447 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 OR2W4P-201ENST00000406496 926 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AL009174.1-201ENST00000426577 416 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC3P19447 AP001324.1-201ENST00000428553 399 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC3P19447 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 USP9YP31-201ENST00000431405 881 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 SEPT7P5-201ENST00000434048 306 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 YWHAZP7-201ENST00000436906 631 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AL031663.1-201ENST00000437445 219 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 MTCO2P7-201ENST00000446518 666 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC3P19447 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC068228.1-201ENST00000461723 211 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 RN7SL221P-201ENST00000466190 281 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC022415.1-202ENST00000486612 523 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 OR4C2P-201ENST00000530855 1064 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 REXO2-218ENST00000544827 880 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 TPRX1P1-201ENST00000557620 319 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC002400.1-201ENST00000569310 726 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AP005136.1-201ENST00000579765 429 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC090312.2-201ENST00000582687 378 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC3P19447 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC3P19447 AC067773.1-201ENST00000603284 1094 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 LSM1P2-201ENST00000604911 322 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC069545.1-201ENST00000605671 358 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC3P19447 AL139418.1-201ENST00000613613 177 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 MIR6729-201ENST00000618194 65 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AC116618.1-201ENST00000634617 774 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC3P19447 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 AC021755.1-201ENST00000559747 1447 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 AL353743.3-201ENST00000442109 1468 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.41□□□□□ -1.22
ERCC3P19447 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC3P19447 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
ERCC3P19447 AP000776.1-201ENST00000530032 1663 ntBASIC7.41□□□□□ -1.22
ERCC3P19447 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms